| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1456 |
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| Symbol | |
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| ID | 4667421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1603235 |
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| End bp | 1604095 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639822655 |
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| Product | farnesyl-diphosphate farnesyltransferase |
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| Protein accession | YP_969821 |
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| Protein GI | 120610143 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAAT CCTCCTTCAT GACACCGGAA CAGTACGTCC AACAAAAAGC CGCGGCGTCC
GGCAGCAGCT TCTATTACGC ATTCCTGTTC CTCCCGCCCG CCAGACGGGC CGCCATCACC
GCCTTCTATG CATTCTGCCG CGAGGTGGAC GACGTGGTGG ACGAGGTGTC GGACGCCGGC
GTGGCCCGGA CCAAGCTGGC CTGGTGGCAG GCGGAAGTCG CCCGCTCGTT CGCGGGCCAG
CCCCCGGCGC ATCCCGTGAT GCAGGCCTTG ATGCCGCACA CCGGCATGTA CGGCATCGAG
GAGCGCCACC TGCAGGCCGT GATAGAGGGG TGCCAGATGG ACCTCGAACA GACCCGCTAC
CTGGACTTCC AGGGCCTTTC TCGGTATTGC CACCTGGTGG CGGGCATCGT CGGCGAGGTG
GCGGCGCGCA TCTTCGGCCC CTCCGACGAA CGCACCGTGG AATACGCCCA TACCCTGGGC
CTCGCTTTCC AGCTGACGAA CATCATCCGG GACGTCGGCG AGGACGCGAT GATGGGCCGC
ATCTACCTTC CCGTGGCGGA GCTGCAGCAG TTCGACGTCA AGGCCCATGA AATCCTGAAG
CGGCAGTATT CCGACCGTTT CACGGCGCTG ATGCGCTTCC AGGCAGAACG CGCCCATGGT
CTTTATGACA AGGCCCTCTC CCTGCTCCCG GGCGACCAGC GGCGGGCACA GAAACCCGGA
TTGATGATGG CCAGCATTTA CCGGACCCTG CTGCGGGAAA TCGAGAGGGA CCAGTTCCAG
GTGCTGCACC AGCGGATCGC ACTCACGCCC CTGCGCAAGC TGTGGCTGGC GTGGAAGATG
CAGGCCCTGG GCCGGATGTG A
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| Protein sequence | MGQSSFMTPE QYVQQKAAAS GSSFYYAFLF LPPARRAAIT AFYAFCREVD DVVDEVSDAG
VARTKLAWWQ AEVARSFAGQ PPAHPVMQAL MPHTGMYGIE ERHLQAVIEG CQMDLEQTRY
LDFQGLSRYC HLVAGIVGEV AARIFGPSDE RTVEYAHTLG LAFQLTNIIR DVGEDAMMGR
IYLPVAELQQ FDVKAHEILK RQYSDRFTAL MRFQAERAHG LYDKALSLLP GDQRRAQKPG
LMMASIYRTL LREIERDQFQ VLHQRIALTP LRKLWLAWKM QALGRM
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