| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1448 |
|---|
| Symbol | |
|---|
| ID | 4668402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1595885 |
|---|
| End bp | 1596382 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639822647 |
|---|
| Product | dihydrofolate reductase |
|---|
| Protein accession | YP_969813 |
|---|
| Protein GI | 120610135 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.349105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTGC GACTCATCTA CGCACGGGCC GCCAATGGCG GCATCGGTCT CCACAACGCC
ATGCCCTGGC ACCTGCCCGA AGACCTGGCG CATTTCAAGC AGCTCACGCT GGGCGCCACG
GTGGTCATGG GGCGCAAGAC CTGGGATTCC CTGCCTGCCC GCTTCCGTCC CCTGCCCGGC
CGCACGAACA TCGTGGTCAC GCGCCAGGCC GGCTGGCACG CGGACGGCGC CCTGTCCGCC
TCCAGCCTGG AGCAGGCGGT GGAACTGGCC CGGCCGCATG GCGATACGGT ATGGGTGATG
GGCGGTGCGC AGATCTACGC CCAGGCCCTT CCGATGGCGG ACGGCGTGGA GGTCACCGAA
ATCCACCGGG ATTTCGAAGC GGACGCCTTC GCCCCCGTGC TGGGCCCCGA ATGGGAGGAG
ACCGCGCGCA CCCCCGTGCA GACCTCCGCC GGCAGTGCGG CCCTTCCCTT TTCCTTCGTC
AGCTACCGGC GCCGCTGA
|
|---|
| Protein sequence | MTLRLIYARA ANGGIGLHNA MPWHLPEDLA HFKQLTLGAT VVMGRKTWDS LPARFRPLPG
RTNIVVTRQA GWHADGALSA SSLEQAVELA RPHGDTVWVM GGAQIYAQAL PMADGVEVTE
IHRDFEADAF APVLGPEWEE TARTPVQTSA GSAALPFSFV SYRRR
|
|---|
| |