| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1440 |
|---|
| Symbol | |
|---|
| ID | 4669024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1586953 |
|---|
| End bp | 1587846 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639822639 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_969805 |
|---|
| Protein GI | 120610127 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTGC TCATCGATTC GTTCTGGCGC GCCGTGGGTT ACTGCCTGCA TCCGCGGGTG
ATTGCCCTCT CGTTGCTGCC GCTGCTGTTG ATCGTTCTTC TGACCGGGCT GTTCTGGTAC
CTGTGGTGGG ACGGCGCGGT GGCTTCCCTC GGTGCCCTGC TCGCGGGTTC CGAGTGGCTG
TCTTTCCTCT GGGGATGGCT GCAGGGATTC GGGGTGGAGG GGCCGGCGTT GCTGGCGCCC
GTGCTGCTGG TGGTTTTGAT CACCCCCGCC ATCGTCGTGC TGTCGGTGCT CGCGGTGGCG
ATGTTGATGG CACCCGCGCT GGTGTCTCTG GTCGCTCGGC GCCGGTTCCC GTCGCTCGAG
CGCCGGGGCC GCGGCTCCTT TCTGGCGAGC CTGGCCTGGT CGCTGGGTTC GACCGTGGCG
GCGCTGGTGG CGCTGGTCCT TTCCATTCCG CTGTGGTTCA TTCCTCCGCT GGTGCTGGTA
CTTCCGCCGC TGATCTGGGG ATGGCTGACG TACCGAGTGA TGGCTTTCGA CGCTCTGGGC
GAACACGCCG ACAAGGCGGA GCGCGAGACG ATCATGCGGC AGTACAAAAT GCAGTTGCTG
GGCATCGGCG TGGTCACGGG CTACCTGGGG GCTGCTCCCG GCATCGTCTG GGCCTCGGGC
ATCGTGTTCG CGGCAGCATT CCTGGTCCTG ATCCCCGTGG CGGTCTGGAT CTATACGCTG
GTATTCGCCT TTTCTTCCCT GTGGTTCGCG CACTATTGCC TGGCAGTGCT GGCGCAGTTG
CGGGCCTCCG GCTCCGGTGG GCGGGGCGTG GACGCAGTGG CCATCGGGCC TGGCGTGCCT
CCAAGTCCGC TTCCCGGGAC TTCTTCGACC ACCCCTCCTG GACATCAGCC ATGA
|
|---|
| Protein sequence | MRLLIDSFWR AVGYCLHPRV IALSLLPLLL IVLLTGLFWY LWWDGAVASL GALLAGSEWL
SFLWGWLQGF GVEGPALLAP VLLVVLITPA IVVLSVLAVA MLMAPALVSL VARRRFPSLE
RRGRGSFLAS LAWSLGSTVA ALVALVLSIP LWFIPPLVLV LPPLIWGWLT YRVMAFDALG
EHADKAERET IMRQYKMQLL GIGVVTGYLG AAPGIVWASG IVFAAAFLVL IPVAVWIYTL
VFAFSSLWFA HYCLAVLAQL RASGSGGRGV DAVAIGPGVP PSPLPGTSST TPPGHQP
|
|---|
| |