Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1438 |
Symbol | |
ID | 4669071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1585059 |
End bp | 1585895 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639822637 |
Product | polysaccharide deacetylase |
Protein accession | YP_969803 |
Protein GI | 120610125 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.776491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCCCG GTAAGGCCAG GATGCCACGA GCAGGCCAAG TGAGCCGCGC GGGCTTGATC TGTGCGGTGG TCTTGTCCCT GGTGCCGCCT GCGGGCGCGG CGGGTGCTGC ATGCGACAAG CCGGTCTATC TGACTCTGGA CACGGGTCAC ATGGGCGTCG CCCCCCTCAT CGCCGATGTG TTGAAGCGCC AGCATGTGCT CGTGACTTTT TTTGCTGCGA ACGAGAAGAC GCAGGAAGGC GACGGCAGCC TGGGCAATTT CTGGGCGGGC TGGTGGAAGG CTCGCGCGGC AGAGGGCCAT GCTTTTGCAT CCCATACCTA CGACCACGTC TATTGGCGTG CGGATGCCGG TCCTGCGGAA TCTCCGAGCT TCCGGGTGCG GCCATCGGCC GGCCCGCGGG CGGGCCAGGA GTTCACTGTC ACGGCACAGC AGTACTGCGC CGAAATCGCC AGATCCGAAG CACGTCTGAA AGAGATCACC GGGCAACCAC CGTTGCCGCT GTTCCGGGCA CCGGGTGGAA AAACCTCCGC CCGCCTGCTG GAGGCCGCAA AACGCTGTGG CTACGCCCAT GTGGGGTGGT CTCCCGCCGG CTTCCTGGGC GATGAGCTTC CGAGCGAGCG CTACAGCAAT CCGGCGCTGC TCCGGCAGGC TCTGGAGCGC ATCCGGCCGG GCGACATCCT GCTGGCGCAC CTGGGCATCT GGTCGCGCAA GGACCCGTGG GCGCCCGCTG TGCTCGAGCC CCTGATCGAG GGGCTGAAGT CCCGTGGATT CTGTTTCCGC ACGCTGCGGG ACCATCCCGG GTACCAGGGC TGGATTGCCG CTCATCCCGT GCGGTGA
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Protein sequence | MLPGKARMPR AGQVSRAGLI CAVVLSLVPP AGAAGAACDK PVYLTLDTGH MGVAPLIADV LKRQHVLVTF FAANEKTQEG DGSLGNFWAG WWKARAAEGH AFASHTYDHV YWRADAGPAE SPSFRVRPSA GPRAGQEFTV TAQQYCAEIA RSEARLKEIT GQPPLPLFRA PGGKTSARLL EAAKRCGYAH VGWSPAGFLG DELPSERYSN PALLRQALER IRPGDILLAH LGIWSRKDPW APAVLEPLIE GLKSRGFCFR TLRDHPGYQG WIAAHPVR
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