| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1436 |
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| Symbol | |
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| ID | 4669179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1583260 |
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| End bp | 1584021 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639822635 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | YP_969801 |
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| Protein GI | 120610123 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.822164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAGATCC AGATTGTGCA ATTGCAAGAT ATCCTGTATT CCCAAGGGTT TGGCACCAGA
AGGGTATGCG CCGGCCTGAT CCAGCATGGC CATGTTCAAC TGCGTGAGAA AGGCGATGCT
GGCGGAGCAT GGACTTGCAC CGATGCCGGG CTGGACGTCG ATCCCGAGGG CTTGACCTTC
TATGTTCAGG GCACGGCTTG GCAATGGCAC GAGCGGGCCT ACGTCATGAT GAACAAGCCG
GCGGCCGTGG AGTGTTCACA GAAACCATCC ACTTATCCCA GCGTCTATAC CTTGCTGCCT
GACCCATTGC GGCAGCGGCC AGGACCGGGA AAGATCCTCG GCGTGCAGAC CATCGGACGG
TTGGACCAAG ACACGACGGG ACTGTTGCTG CTGAGCGATG ACGGCAGTTT CATCCACCGC
GTGAGCTCTC CGAAGAAACA AATACAAAAG ACCTACAGGG TGCACGCCAA GTATGATCTT
TCTCAACAGC AGAAGGATCA GCTACTGAAG GGCGTCGTAT TGAACGATGA TCCGAAACCG
GTGATCGCTG TGGACTGCGT CCTCCAGGAA GGCCCGGTTT TCGATCTCAC GGTCACCGAA
GGAAAGTACC ACCAGATCAA GCGGATGGTG GCTGCCGTGG GTAACCGTGT GGAGCAGTTG
CACCGCATCC GCATCGGTGG CTTGCATTTG CCCGATGATC TGCAGGCTGG TGATTGGCGG
TGGCTCCGTG AAGAGGATGT CCGCAGGATC TTTGAAGGTT GA
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| Protein sequence | MEIQIVQLQD ILYSQGFGTR RVCAGLIQHG HVQLREKGDA GGAWTCTDAG LDVDPEGLTF
YVQGTAWQWH ERAYVMMNKP AAVECSQKPS TYPSVYTLLP DPLRQRPGPG KILGVQTIGR
LDQDTTGLLL LSDDGSFIHR VSSPKKQIQK TYRVHAKYDL SQQQKDQLLK GVVLNDDPKP
VIAVDCVLQE GPVFDLTVTE GKYHQIKRMV AAVGNRVEQL HRIRIGGLHL PDDLQAGDWR
WLREEDVRRI FEG
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