Gene Aave_1431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1431 
Symbol 
ID4669176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1571849 
End bp1573264 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content67% 
IMG OID639822625 
ProductHflK protein 
Protein accessionYP_969796 
Protein GI120610118 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.936066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGCACAA TGCCGCGAGA CCCATCTTCT CGAAAACTAG AGATCTATCG CATGAATCAT 
CCTTTCAGAG CCTGGCGTCT GGCATCGCTG CCCGGGCGGA TCCGGGGCAT GTTCAATCTG
AATGATCCCC GCTGGGGCCG CGGCGATGAC AAGGCTGATG GTGCGAACCG CCCGGATTCC
GATCGTCCGA ACCCGCCTCC CGGGGGTAAC CGCGGCCGCG ATCCCCAGGG CCAGCCGCCC
GACCTGGACG AACTGTGGCG CGACCTCAAC CGCAAGCTCG GGGGCCTCTT CGGCGGACGC
AACGGCGGCG GGCGCGGTCC CGGCAACGGA TCGGGCGGTG GATTCCAGCC CGACATGAAG
AACACCGGCG TGGGCGTCGG CCTGATCGCC GCGGTGGCCG TGCTGATCTG GCTGGGCTCC
GGCTTCTTCA TCGTCCAGGA AGGGCAGCAG GCCGTCATCA CCCAGTTCGG CAAGTACAAG
ACCACGGTCA ACGCCGGCTT CAACTGGCGC CTGCCGTACC CCATCCAGCG GCACGAACTC
GTGTTCGTCA CCCAGATCCG TTCCGCCGAC GTCGGCCGGG ACAGCATCAT CAAGAGCACC
GGCCTGCGCG AGTCGGCCAT GCTCACCGAG GACGAGAACA TCGTCGAGAT CAAGTTCGCC
GTCCAGTACC GCCTGAACGA TGCCCGGGCC TGGCTGTTCG AGAGCCGCAA CCCCGGTGAA
GCCGTGATCC AGGTGGCCGA GACGGCCGTG CGCGAGATCG TCGGCAAGAT GCGCATGGAT
ACCGCCCTGG CCGAGGAACG CGACCAGATC GCGCCCCGCG TCCGCACCCT CATGCAGACC
ATCCTGGACC GCTACAAGAT CGGTGTCGAG GTGGTGGGCA TCAACCTGCA GCAGGGCGGC
GTGCGTCCGC CCGAGCAGGT GCAGGCCGCG TTCGACGATG TCCTGAAGGC CGGTCAGGAG
CGCGAGCGCG CGAAGAACGA AGCCCAGGCC TACGCCAACG ACGTGATTCC CCGCGCGGTC
GGTTCCGCTT CCAGGCTCAC CGAGGAAGCC GCCGCCTACA AGGCCCGGAT CGTCGCCCAG
GCGCAGGGGG ATGCCCAGCG CTTCAGCTCC GTGCTCACCG AGTATCAGAA GGCGCCGCAG
GTCACCCGCG ACCGCATGTA CCTCGAAGCC ATGCAGCAGA TCTACTCGAA CGTCACCAAG
GTGCTGGTGG ACTCGCGCCA GGGTTCGAAC CTGCTGTATC TCCCGCTGGA CAAGATCATG
CAGAACGTTT CCCAGGGCGG AGCCGCCGCG GCGCCCACCC CGGAAGCGCC CCCGGCATCG
TCGTCCTCAT CCATACCTTC CAGTACCACC CAGGCATTCC CCATCGATTC CCGCGCGCGC
GACACCAGCC GCACCCGGGA CCGTGAAGCC CGCTAG
 
Protein sequence
MGTMPRDPSS RKLEIYRMNH PFRAWRLASL PGRIRGMFNL NDPRWGRGDD KADGANRPDS 
DRPNPPPGGN RGRDPQGQPP DLDELWRDLN RKLGGLFGGR NGGGRGPGNG SGGGFQPDMK
NTGVGVGLIA AVAVLIWLGS GFFIVQEGQQ AVITQFGKYK TTVNAGFNWR LPYPIQRHEL
VFVTQIRSAD VGRDSIIKST GLRESAMLTE DENIVEIKFA VQYRLNDARA WLFESRNPGE
AVIQVAETAV REIVGKMRMD TALAEERDQI APRVRTLMQT ILDRYKIGVE VVGINLQQGG
VRPPEQVQAA FDDVLKAGQE RERAKNEAQA YANDVIPRAV GSASRLTEEA AAYKARIVAQ
AQGDAQRFSS VLTEYQKAPQ VTRDRMYLEA MQQIYSNVTK VLVDSRQGSN LLYLPLDKIM
QNVSQGGAAA APTPEAPPAS SSSSIPSSTT QAFPIDSRAR DTSRTRDREA R