| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1424 |
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| Symbol | ispG |
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| ID | 4669558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1564336 |
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| End bp | 1565616 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639822618 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_969789 |
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| Protein GI | 120610111 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.726713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.908147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCACA CTCCCAATGC CGAATCCCCC ATCGCCATGG CATCGCCGCT GCCGCGGCGG
TCGCGCCAGG CACGCATCGC CTGGGGCGAC CGGGTGGTGA CGGTCGGCGG CGACGCGCCC
GTGCGCGTGC AGTCCATGAC CAACACCGAC ACCGTGGATG CAATCGCCAC GGCCATCCAG
GTCAAGGAAC TGGCGCAGGC AGGTTCCGAG TTCGTGCGCA TCACCGTCAA CACGCCCGAG
GCGGCAGCCG CCGTTCCGTA CATCCGCGAG CAGCTCGACC GCATGGGCGA GACCGTGCCG
CTGGTGGGCG ATTTCCACTA CAACGGACAC CGCCTGCTCA CCGAATACCC GGATTGCGCC
CAGGCGCTTT CCAAGTACCG CATCAACCCC GGCAATGTCG GCAAGGGCGA CAAACGCGAC
CGGCAGTTCG GCCAGATGAT CGAGGCGGCC ATGCGGTGGA ACAAGGCCGT GCGCATCGGC
GTGAACTGGG GCAGCCTCGA CCAGGAACTG CTCGCCGGCC TGATGGACGC TAACAGCCGG
CGTGCCGTGC CCTGGGATGC CCGGCAGGTC ATGTACGAGG CCCTGATCAC CTCCGCCATC
GAATCGGCGC AGCGGGCCGA GGCCATGGGG CTCGATGGCA ACCAGATCAT CCTGTCCTGC
AAGGTCAGCG GCGTGCAGGA TCTCATCGCC GTGTACCGCG AACTCGCCCG CCGCTGCGAC
TACGCCCTGC ACCTGGGCCT GACCGAGGCG GGCATGGGCA CCAAGGGAAC GGTCGCCTCC
GCGGCTGCGC TGTCGGTGCT GCTGCAGGAG GGCATCGGGG ACACCATCCG GGTGTCGCTC
ACGCCCCAGC CCGGCGAGGC CCGTACCCAG GAAGTCATCG TGGCTTCCGA GATCCTGCAG
GCCCTGGGCC TGCGCGTCTT CGTGCCCAGC GTCACCGCCT GCCCGGGCTG CGGGCGCACC
ACCAGCACCA CCTTCCAGGA ACTGGCCAAG CAGATCGACG ACTTCCTGCG CTCGCAGATG
CCCGTCTGGC GCACCCGCTA TCCTGGCGTC GAGAAAATGA AGGTGGCCGT GATGGGCTGC
ATCGTGAACG GTCCCGGCGA AAGCAAGCAC GCCGACATCG GCATCAGCCT GCCCGGAACG
GGCGAGGCCC CGGCCGCGCC GGTATTCATC GATGGAGAGA AGGCGATGAC CCTGCGGGGA
GAGCACATCG CCCGCGACTT CCAGCAGGTG GTCGAGGACT ATATTTCCCG CCGCTTCGGC
AGCACCGCCG AGGTTCTCTG A
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| Protein sequence | MIHTPNAESP IAMASPLPRR SRQARIAWGD RVVTVGGDAP VRVQSMTNTD TVDAIATAIQ
VKELAQAGSE FVRITVNTPE AAAAVPYIRE QLDRMGETVP LVGDFHYNGH RLLTEYPDCA
QALSKYRINP GNVGKGDKRD RQFGQMIEAA MRWNKAVRIG VNWGSLDQEL LAGLMDANSR
RAVPWDARQV MYEALITSAI ESAQRAEAMG LDGNQIILSC KVSGVQDLIA VYRELARRCD
YALHLGLTEA GMGTKGTVAS AAALSVLLQE GIGDTIRVSL TPQPGEARTQ EVIVASEILQ
ALGLRVFVPS VTACPGCGRT TSTTFQELAK QIDDFLRSQM PVWRTRYPGV EKMKVAVMGC
IVNGPGESKH ADIGISLPGT GEAPAAPVFI DGEKAMTLRG EHIARDFQQV VEDYISRRFG
STAEVL
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