Gene Aave_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1421 
Symbol 
ID4668433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1561396 
End bp1562517 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content67% 
IMG OID639822615 
Productradical SAM protein 
Protein accessionYP_969786 
Protein GI120610108 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.196113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA ACCTTCTCGA CTTCGACCTG GACGGGCTCG CCGCCTTCTG CGAGCAGCTC 
GGGGAGAAGC GTTTCCGCGC GGTCCAGCTT TTCCGCTGGA TCCACCAGCG CGGCGCCAGC
GATTTCGCCC GGATGAGCGA CCTGGCGAAG TCGCTGCGCG AGAAGCTCTC GGGCTGCGCC
CATGTCGCGG CCCTGCCGGT CATCAGCGAG CACGTGTCCG CCGATGGCAC CGTCAAGTGG
CTCTTCGACG TCGGCGACGG CAATGCGGTC GAGTCCGTGT TCATCCCCGA GGATGACCGC
GGCACGCTGT GCATTTCCTC GCAGGCCGGC TGCGCGGTGG GCTGCCGCTT CTGCTCCACG
GGGCACCAGG GTTTCAGCCG CAACCTCACC AGCGGCGAGA TCGTCGCCCA GCTGTGGTTC
GCCGAGCACG CCCTGCGCGC ACGCCTGGGA ACCCAGGAGC GTGTCATCTC CAACGTGGTC
ATGATGGGCA TGGGCGAACC CTTGCAGAAC TACACCGCAC TGGTGCCGGC GCTGCGCACC
ATGCTCGACG ACCATGGCTA TGGCCTGTCG CGGCGGCGCC TCACGGTATC CACCTCCGGT
GTCGTGCCCA TGATGGACCG CCTGTCACAG GACTGCGCCG TGGCGATGGC CGTGTCGCTG
CATGCGCCGA ACGACGCCCT GCGGGACCAG CTGGTTCCCC TGAACCGCAA ATACCCCCTG
CGCGAACTGC TCGACGCCTG CACGCGTTAC CTGGAGCATG CGCCGCGGGA TTTCATCACC
TTCGAATACT GCATGCTCGA TGGCGTCAAC GACCAGCCCG AGCATGCGCG CCAGCTCATC
GACCTCGTGC GCCCGCGCGG CGGGGAGGGC GTGCGCTGCA AGTTCAACCT GATTCCCTTC
AACCCGTTTC CCGCTTCCGG ACTGCACCGT TCCAACCCTC AACAGGTGGC GGCTTTCGCG
AAGATGCTCA GCGATGCGGG TATCGTTACG ACCGTGCGCA AGACACGCGG CGATGACATC
GACGCGGCCT GCGGGCAGCT CGCGGGCGAT GTGAAGGACC GCACCCGGGC GGCCGAACGC
ATGGCCAGGC AGCGCACGAT CGTTCTCAAA CCGGTGGCCT GA
 
Protein sequence
MTKNLLDFDL DGLAAFCEQL GEKRFRAVQL FRWIHQRGAS DFARMSDLAK SLREKLSGCA 
HVAALPVISE HVSADGTVKW LFDVGDGNAV ESVFIPEDDR GTLCISSQAG CAVGCRFCST
GHQGFSRNLT SGEIVAQLWF AEHALRARLG TQERVISNVV MMGMGEPLQN YTALVPALRT
MLDDHGYGLS RRRLTVSTSG VVPMMDRLSQ DCAVAMAVSL HAPNDALRDQ LVPLNRKYPL
RELLDACTRY LEHAPRDFIT FEYCMLDGVN DQPEHARQLI DLVRPRGGEG VRCKFNLIPF
NPFPASGLHR SNPQQVAAFA KMLSDAGIVT TVRKTRGDDI DAACGQLAGD VKDRTRAAER
MARQRTIVLK PVA