| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1419 |
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| Symbol | |
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| ID | 4668070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1559356 |
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| End bp | 1560807 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639822613 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_969784 |
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| Protein GI | 120610106 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.829241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAT CCGAGCCCGA TCACGACGGA ACCGCCGCTG CCCCGCAGTC CGCAGCCGAC
GACGCCTCCG CGGCCCAGAA GCCCGCCCGC CGCGCGCCGC GCAAGCGGGC CGCGGCCGCT
GCCGGGTCCG AATCCGCCAC GGCGTCCGAT CCTGCGCCTG GCGTGCCTGC CGATGGCGCC
GCCAGCGCCC AGGCCGTGTC CGAACCCGCT CCACCGGAAG CCACCCCGGA CGACGGCGCA
CCCGGAGCGC GCCCGGCCGC GCCTGCCTCG CGGCCACAGC GGGAGCGCAG GGAGCCGGCG
CCGCGTGGAC CGCGGGGCCG GCCGAACCCG GCCGCTCCGG AGGGCTACCG GTTCGACGAC
GTGGTCTCTG GCCAGCTCGA TGCCGATGAA GACCGCGCCG ACGTGGCGCC CGCCAAGCGC
GTGCTGCCGC CGCAGGTGGA AATGCCCAAG CTGCACAAGG TCCTGGCCCA GGCCGGACTG
GGCTCCCGGC TGGAGATGGA GCAGCTCATC CTCGAAGGCC GCATCTCCGT CAACAACGAG
CCGGCCCACA TCGGGCAGCG CGTCCAGTAC GGGGACCAGG TCAAGGTCAA TGGCCGGCCC
ATCCGCTACC GCATCGATCC GCCCGCGCCC CGGGTGATCG CCTACCACAA GCCCGTCGGC
GAAGTCGTCA CCCACGACGA CCCCCAGAAC CGGCCCACCG TGTTCCGCAA GCTCCCGCGC
CTGGCCCATG GCAAATGGCA GTCCGTGGGG CGCCTGGACC TGAACACCGA AGGCCTGCTG
CTCTTCACCA GCGCGGGCGA GCTGGCCAAC AAGCTCATGC ACCCCCGTTT CGGCCTGGAG
CGGGAATACG CGGTGCGGGT GCTGGGCGCC CTGAGCAACG AGGAAAAGCA GCGCCTGCTC
GACGGCGTCC AGCTCGAGGA CGGCATGGCT GCCTTCGGCT CCATCGAGGA CGGCGGGGGC
GAGGGCTCGA ATTGCTGGTA CCGCGTCACC ATCTCCGAAG GCCGCAACCG CGAGGTGCGG
CGCATGCTCG AGTCGGTGGG GCATGCCGTC AGCCGCCTGA TCCGCATCCG CTACGGCTCC
ATGATGCTGC CGCGCGGCCT CAAGCGCGGC GCGTGGCTGG AACTGGACGA GCGCGACATC
CGCGCACTGA TGCAGGCCGC CGGCGCCGAC ATGCCGCGCC CCGCCGGGCC AGGTGCCGCC
GCGGGCGACC GCAAGGGAGG CGGCCCGCGC AAGGGCGGCG GGCGCGGCCA GGGTGGCCCC
GGTGGCCCGG CGCCTCGGGG TGACTATTTC AATCCGCCCG CTGGCGGCCG GGGCAAGCGT
GCCGCGCCGT CCTCCAGCCA GCCCGATCCG ATGAAGACCT CCGTGGGCTA CATCGGCAGC
GACAGCCTCG CGCGCCACCG CCAGGACCAG AAGCAAAAGC GCAAGGCCTT CCAGAAGCGC
GGCGGTCGCT GA
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| Protein sequence | MNPSEPDHDG TAAAPQSAAD DASAAQKPAR RAPRKRAAAA AGSESATASD PAPGVPADGA
ASAQAVSEPA PPEATPDDGA PGARPAAPAS RPQRERREPA PRGPRGRPNP AAPEGYRFDD
VVSGQLDADE DRADVAPAKR VLPPQVEMPK LHKVLAQAGL GSRLEMEQLI LEGRISVNNE
PAHIGQRVQY GDQVKVNGRP IRYRIDPPAP RVIAYHKPVG EVVTHDDPQN RPTVFRKLPR
LAHGKWQSVG RLDLNTEGLL LFTSAGELAN KLMHPRFGLE REYAVRVLGA LSNEEKQRLL
DGVQLEDGMA AFGSIEDGGG EGSNCWYRVT ISEGRNREVR RMLESVGHAV SRLIRIRYGS
MMLPRGLKRG AWLELDERDI RALMQAAGAD MPRPAGPGAA AGDRKGGGPR KGGGRGQGGP
GGPAPRGDYF NPPAGGRGKR AAPSSSQPDP MKTSVGYIGS DSLARHRQDQ KQKRKAFQKR
GGR
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