| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1418 |
|---|
| Symbol | |
|---|
| ID | 4668409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1558535 |
|---|
| End bp | 1559359 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639822612 |
|---|
| Product | condensin subunit ScpB |
|---|
| Protein accession | YP_969783 |
|---|
| Protein GI | 120610105 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACGG TGGATGCCAA ACGGGTCCTC GAAACCGCGC TGATCTGTGC GCCGCAGCCC
GCGATGCTGC GGGAGCTGCG CACGCTCTTT CAAGATGCGC TGGGCGCCGA CACCATCAAG
CGGTTGCTGG TGGAGCTGCA GCAGGAGTGG TCCCAGCGCG GCGTCGAGCT CGTGCAGGTG
GCCTCGGGCT GGCGGTTCCA GAGCCGGCCC GAGATGCGCG AATACCTGGA CCGGCTCCAT
CCCGAGAAGC CCCCGCGCTA TACCCGCGCC GCCCTCGAGA CGCTGGCCAT CATCGCCTAC
CGGCAGCCCG TCACCCGTGG CGATATCGAA GAGATCCGCG GCGTGACCGT CAACAGCCTG
ATCCTCAAGC AACTCGAGGA CCGGGGCTGG GTGGAAGTGA TCGGGCACCG CGAGACCGTC
GGCCGTCCCG CCCTGTTCGC GACCACCCGC CAGTTTCTCG ACGACCTGGG GCTGAAGTCC
CTGGACGAGC TGCCCATGCT GGAAAATCCC GCTGTCCAGT CCAGCGTCCT GGAGGCCCTG
GAGCGCGGGG CGGCAGAGCC AGGAGACGAC GGACCGGGGG ATGCCGCCGA GGCACCTCCC
GCCTCGCCCG CGGAGCCTGA CTCCGCCGAC GCACCGGGCG ACCCCGACCT CGATCCCGGT
CCCCATCCGG GTCCCCCGGA GCCCGCCGGC AGCGATGCCG ACGCCACCGA TGCCGCCTCT
ACCGTCCCGG AAGACGCCGC ACCCACAGAA TCACCGACGA CCACCGATGA CGATTCGGAG
CCCCGGCGCC CCGAACCTCC GGTTCCTCCC GAAAGCACGC CATGA
|
|---|
| Protein sequence | MNTVDAKRVL ETALICAPQP AMLRELRTLF QDALGADTIK RLLVELQQEW SQRGVELVQV
ASGWRFQSRP EMREYLDRLH PEKPPRYTRA ALETLAIIAY RQPVTRGDIE EIRGVTVNSL
ILKQLEDRGW VEVIGHRETV GRPALFATTR QFLDDLGLKS LDELPMLENP AVQSSVLEAL
ERGAAEPGDD GPGDAAEAPP ASPAEPDSAD APGDPDLDPG PHPGPPEPAG SDADATDAAS
TVPEDAAPTE SPTTTDDDSE PRRPEPPVPP ESTP
|
|---|
| |