| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1409 |
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| Symbol | |
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| ID | 4667821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1547240 |
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| End bp | 1548292 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639822603 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_969774 |
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| Protein GI | 120610096 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.494264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACAC GGCGGCTGCC TCCGCAGCCA GTCTGGGCCA CGAACCAATT TTCGCGAGGA
CGGGGAAAAC ACATGGGCAA GCATTTCTGG GCAGCATTCG CCACCGTGCT GGCGTTCTGG
GCAACGCCCG CCACCAGCCA GACCACCGCG CCGCTGCGGG CATGGAACAT CCATCCCGAC
GGCTATCCGG TCACCGAGGC GATGAAGAGC TTCGCCGCCG AAGTGCAGGC CGGCACCCAG
GGCCGCCACC AGATCCAGAT CTTCTCCGAT GCCGTCCTGG GCGACCAGTC CAAGGCAGTG
CAGATGCTCA AGGCCGGCGA GATCGATGTC GCGGAGTTCA ACTTGGGCCC GCTCGCGGAA
GCGGTGCCGC CGCTGCAGGC CTTCAACCTG CCCTTCCTGT TCAGCAGCGC CACGCACATG
TTCCGCTACC TGGACGGCCC GATGGGCGAG CGGCTCGCGG AAAAGCTCAA GGCGTCCGGC
TACGTCGTGC TGGGCTGGTA CAACGGCGGC GCCCGCTCGT TCTATTGCGC CGACAAGCCC
ATCACCCGCC GCGAGGACCT GGCGGGGCTG CGCATCCGCG TGCAGCAGGT CGATTCGCAC
ATCGAGATGG TGAAGCTGCT GGGCGCCACG CCGGTGGTCG TGCCCTACAA GGAAGTGCCT
GAGAGCTTCC GCGCCGGCAG GATCGACTGC GCGGAAGGCA ATATCGTCTC GTACGAGTCC
ACCGGCCAGT ACAAGCTGGC GAAATACATG CTGCTGGACC AGCACATCAT CGCGCCCGAG
GCGCTGGTGG TGTCCACCCA GCTGTGGAAC CGCCTGAACG AGGAGGACCG CAAGGTGTTC
CTGAAGGCCG GCAAGGACTC AGCGCTGCTG ATGCGCGGCC TCTGGGAAAA GCGGGAACTC
GCGGCCCGCA CCGCCCTGGC CAAGGAAGGC GTGCAGTTCG TCCACGTGGC AGACTTCTCG
CCCTACGTGC GCCGCATGGC GCCGCTCTAC AAGAAGTACA CCGACAACCC CGATGTGCGG
GGCGACCTGC TCACCATCAT CTCCAACCAG TGA
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| Protein sequence | MATRRLPPQP VWATNQFSRG RGKHMGKHFW AAFATVLAFW ATPATSQTTA PLRAWNIHPD
GYPVTEAMKS FAAEVQAGTQ GRHQIQIFSD AVLGDQSKAV QMLKAGEIDV AEFNLGPLAE
AVPPLQAFNL PFLFSSATHM FRYLDGPMGE RLAEKLKASG YVVLGWYNGG ARSFYCADKP
ITRREDLAGL RIRVQQVDSH IEMVKLLGAT PVVVPYKEVP ESFRAGRIDC AEGNIVSYES
TGQYKLAKYM LLDQHIIAPE ALVVSTQLWN RLNEEDRKVF LKAGKDSALL MRGLWEKREL
AARTALAKEG VQFVHVADFS PYVRRMAPLY KKYTDNPDVR GDLLTIISNQ
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