Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1398 |
Symbol | |
ID | 4667042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1531972 |
End bp | 1533804 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639822592 |
Product | hypothetical protein |
Protein accession | YP_969763 |
Protein GI | 120610085 |
COG category | [R] General function prediction only |
COG ID | [COG3950] Predicted ATP-binding protein involved in virulence |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACCTGA AACACCTCAT GATCTACAAC AGCGGGCCGA CCCAAGAGCT TGACCTGCAG CCGCAGTTTA CCGCCGATGG TTTGCCTAAG CCGCTAATCT TGGTAGGCCT GAACGGGGCT GGCAAGACAA ACGTGCTGTC GACAATTGCG GACGCCATCC TTGAACTGCA GGTGGCTGCC GGATTCAACG ACATACTTCC CAATAACAAG ATGGGGAGGC GCTTGTTCTA TCGCCTTCTC GGGGGCTCGA CGACCAGCTT GAATCGTTCT TTTGAAGTCT CAGTCGCGAC ATTCAAGCAT GCTGAGAGCT CTTTTTCGTA CCGCGCTCAG ACTGGTCCTG TGCCTGAAAC AGTCATCAAT AAGCTGGAGA CGATCGCAGC GTTTGATGTA TGGAATGTTG AACCAGCAAA GGAAGTAATT GGCGACAGCG CTCAGCTTAA AAACATCTTT ATCTCGGATT CCTACAGCTT CTTTCCCGTC AATCGAAACG AAGATGCGTG GTGGCAGAGT CTGCGCATGG AGCAGTCCGA GGATGTGCGT TTCGCGCATC GTGTAAACGG CGAACTGGCG AAGCCCGTCG TACTTCAGAC ATCGTTCGCT CTTTTGAAGC CGTGGATCGC GGATGTCATT CTCGACCAAG CGGTTGACGC GTCTATGGTG CTTACCATGG TGTCTCAGCC CAACTCGGGA CGAATCGCAG ACCTTATGGC GAGGGCCAAC CAAGGCACTC TCACCGCAAT CAACACTGTC TTTAGCACCA TCCTTCGTCA GCAGGTTTTC GTGACGCGCG ATGGTCGGGG AGCTGGTGCG TCGAAGCTGT TTTTGCGGGA CCTCACTGGC AGTACCGTTC TGAGAAGCCT TGATTCCCTC TCGACTGGCC AAGCTGCATT GGCCGCGATC TTTCTTAACA TCATCCGCTA TTCAGACATG GGGCGGCCGG GGATACGCCT TGAAGAGATC GCGGGGATCT CTGTGATCGA TGAGGTCGAC GCCCACTTGC ATTCGGAGCT TCAGACTGAG GTACTACCAG CATTGATGAA GCTTTTTCCT CGCGTGCAGT TCGTCGCGAC TTCTCATGCC CCCCTGTTTG CGCTCGGGAT GGAGCGTGTC TACGGCCCTG CTGGCTACAG TTTGGTCGAA CTGCCGTCCG GCCTCACCAT CAGCCCAGAG AGGTTCGGAG AGTTTCAGCG CAGCTTCGAC TACTTCACCG AGACGAAGGC CTTTGAGTTG TTGATGCGGG AAGCCGCTGT TGCCGGCAAG CGTCCTTCGG TAATCTGCGA AGGGGAAACA GATCCAAAGT ATCTACAGCG AGCTGCGGAA CTATTGGGCT TTGACGACTT TGCAGCCAAT GTCGACTTCG ACTGGATTGG ATCCAAGGAG GGTGGCACGG CCAAGAACGG CGGGGCCGGC GCATTGGACA ACGCCGTGCG GCTGTTCAAG TGCAATCCGA ATTTGGTTGC GGTGCCGTTG GCGCTCGTCT ACGACTGCGA TCAACCAGGT GAAGACTACA CGCAAACCAA TTTCTTAGTC ATGCGGCTGC CTCGCAACGA AGCCAACACA GTTCGAAAGG GAGGCATTGA GAATCTTCTG CCGCCGCACG TCTTCGAAGA AGAATTCTTC GAGACGAAGA AAATCGAGAG AGGCGGCGAT GACAAAGTCA TCACCACGAC CATAGCCCTG CGCAAGGTAG CCTTCTGTGA ACACATCTGC GCTCGCGGAG ACGTGAAGGA CTTCGCCCAG TTCGAGCCGA TCATAGATCG GTTGGCACGC TTTTTTGGAA TGCCGCGCTC CGATCCAAGG GCGGCTGTAG AGATAGCAGC TGTCGAAGAT TAA
|
Protein sequence | MHLKHLMIYN SGPTQELDLQ PQFTADGLPK PLILVGLNGA GKTNVLSTIA DAILELQVAA GFNDILPNNK MGRRLFYRLL GGSTTSLNRS FEVSVATFKH AESSFSYRAQ TGPVPETVIN KLETIAAFDV WNVEPAKEVI GDSAQLKNIF ISDSYSFFPV NRNEDAWWQS LRMEQSEDVR FAHRVNGELA KPVVLQTSFA LLKPWIADVI LDQAVDASMV LTMVSQPNSG RIADLMARAN QGTLTAINTV FSTILRQQVF VTRDGRGAGA SKLFLRDLTG STVLRSLDSL STGQAALAAI FLNIIRYSDM GRPGIRLEEI AGISVIDEVD AHLHSELQTE VLPALMKLFP RVQFVATSHA PLFALGMERV YGPAGYSLVE LPSGLTISPE RFGEFQRSFD YFTETKAFEL LMREAAVAGK RPSVICEGET DPKYLQRAAE LLGFDDFAAN VDFDWIGSKE GGTAKNGGAG ALDNAVRLFK CNPNLVAVPL ALVYDCDQPG EDYTQTNFLV MRLPRNEANT VRKGGIENLL PPHVFEEEFF ETKKIERGGD DKVITTTIAL RKVAFCEHIC ARGDVKDFAQ FEPIIDRLAR FFGMPRSDPR AAVEIAAVED
|
| |