| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1396 |
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| Symbol | |
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| ID | 4666954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1529767 |
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| End bp | 1530537 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 639822590 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_969761 |
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| Protein GI | 120610083 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCCATG CCGTCGTCAC CGGCAGCAGC AGCGGCATCG GCCGCGCCAT CGCCGAATCG
CTGCTCGCCA CCGGCTGGCG CGTGACGGGG CTCGACATCG CGCCGCCCGC CATCGCGCAC
CCGGCCTTCG CGCACCTGCC CGTGGACCTG GCCGACGGCG AGGCCATCGC CCGCGCCGCG
GCGGGGTTGC TGGAGGCGGA TCCGCGCGAA ATCGTGGCGC CGAACACATC GGGCCACGCC
AGCTCCCAGC CGCCGAATTC CCCGCCCGCG CCCCAGGCCC CCGATGCCTT GGTGCACGCT
GCAGGCGTGT TGCGCGTCGG CCCGCTCGGC CAGCTGGACC ATGCCGGCGG CGCACTCATG
TGGCGCCTGC ACGTCGATGC GGCCACGCGC CTTGCTGATG CCCTCGTGCC CGCCATGGCC
GCACGCGGGC GGGGCCGCGT CGTCTTCATC GGCAGCCGCG TGGCCCAGGG CATGCCCGGG
CGCGGCCAGT ACGCCGCCAC CAAGGCCGCG CTCATCGCGC TCGCGCGCAG CTGGGCGGCC
GAAGTGGCGG GGCAGGGCGT CACCGTCAAC GTCGTCTCGC CCGCCGCCAC CGCCACCGGC
ATGCTCGCCG ACCCGGCCCG CGCCGGCAGC GCGCCGCGCC TGCCGCCCAT CGGCCGCCTC
ATCGACCCCG CGGAAATCGC CGCGCTCACG GGCTACCTGC TCTCGCCCGC GGCCGCCGCC
ATCACCGGGC AGGACATCGC CATCTGCGGC GGCTCCTCGC TCGCCCGCTG A
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| Protein sequence | MPHAVVTGSS SGIGRAIAES LLATGWRVTG LDIAPPAIAH PAFAHLPVDL ADGEAIARAA
AGLLEADPRE IVAPNTSGHA SSQPPNSPPA PQAPDALVHA AGVLRVGPLG QLDHAGGALM
WRLHVDAATR LADALVPAMA ARGRGRVVFI GSRVAQGMPG RGQYAATKAA LIALARSWAA
EVAGQGVTVN VVSPAATATG MLADPARAGS APRLPPIGRL IDPAEIAALT GYLLSPAAAA
ITGQDIAICG GSSLAR
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