| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1389 |
|---|
| Symbol | |
|---|
| ID | 4666487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1522504 |
|---|
| End bp | 1523739 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639822583 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_969754 |
|---|
| Protein GI | 120610076 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.853054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTTT CTTCCGCATC CCCGTCCCCG TCCCCGTCCT CTTCCCCGCA ACGCCCCCTG
CCGCTGTCCG GCCTGCGCGT GGTGGAGTTC ACCCACATGG TCATGGGGCC GACCTGCGGC
ATGGTGCTGG CCGACCTCGG CGCCGAGGTC ATCAAGGTCG AACCCGTGGA CGGCGACCGC
ACGCGCCACC TGCTGGGCGC GGGCGCGGGC TTCTTCCCCA TGTTCAACCG CAACAAGAAG
AGCATCGCCA TCGACCTGCG CAGTCCCGGG GGCCTGGAGG TGGCGATCCG CCTCGCGTCC
TCCGCCGACG TGGTGGCGCA GAACTTCAAG CCCGGCGTCA TGGCCAAGTA CGGCCTGGAC
TACGGCGCGC TCTCGCGCCT GAACGAAGGG CTGGTGTACG TGAACCACGC CGGCTTCCTG
CCGGGGCCCT ACGAGCACCG CACGGCGCTC GACGAGGTGG TGCAGATGAT GGGCGGCCTC
GCCTACATGA CCGGCCGTCC CGGTGACCCG CTGCGCGCCG GCGCCAGCGT GAACGACATC
ATGGGCGGCA TGTTCGGCGC CATCGGGGCC ATGGCGGCGC TGATGCAGCG CGCGCACACC
GGGCGCGGGC AGGAGGTGGA TTCCGCGCTG TTCGAGAACA ACGTGTTCCT GGTGGGCCAG
CACATGATGC AGTACGCCGT GACCGGGCAG CCGGCAGCGC CCATGCCGGA CCGCATCTCT
TCCTGGGCCG TGTACGACGT GTTCGGCGTG AAGGACGGCG GGCAGATCTT CCTGGCGGCG
GTGAGCGACG CGCAGTGGCA GACCTTCTGC GATGCCATGG GCTACGCCGA TCTGAAAGCC
GACCCGGCCC TGGCCACCAA CAACGACCGC GTGCGGGCCC GGGGCACGTT GTTGCCGGAG
CTGCGGCGGC GCCTCGCGCA GCACACGGCC GACGCGCTCG CCGCCATCTT CGAGCGCCAC
GGCCTGCCGT TCGCGCCCAT CCTGCGGCCC GAACAGCTCT TCGACGATCC CCACCTGAAC
GCCACCGGCG GCCTGGCCGA AGTCACGCTG CCCGACGGCG ATCGCGCCGG CGAGCGAGCG
CGCGTCACCC TCCTGCCGCT GCGCATGGAC GGCGGACGCC TGCCCGTGCG CGCCGATCCG
CCGCGCCTGG GCGAACACAC GCGCGAACTG CTCGAAAGCC TGGGATACGC CCCGGACGCC
ATCGACGCGC TGCGCGAGGC CCGCGCCGTG GCCTGA
|
|---|
| Protein sequence | MTFSSASPSP SPSSSPQRPL PLSGLRVVEF THMVMGPTCG MVLADLGAEV IKVEPVDGDR
TRHLLGAGAG FFPMFNRNKK SIAIDLRSPG GLEVAIRLAS SADVVAQNFK PGVMAKYGLD
YGALSRLNEG LVYVNHAGFL PGPYEHRTAL DEVVQMMGGL AYMTGRPGDP LRAGASVNDI
MGGMFGAIGA MAALMQRAHT GRGQEVDSAL FENNVFLVGQ HMMQYAVTGQ PAAPMPDRIS
SWAVYDVFGV KDGGQIFLAA VSDAQWQTFC DAMGYADLKA DPALATNNDR VRARGTLLPE
LRRRLAQHTA DALAAIFERH GLPFAPILRP EQLFDDPHLN ATGGLAEVTL PDGDRAGERA
RVTLLPLRMD GGRLPVRADP PRLGEHTREL LESLGYAPDA IDALREARAV A
|
|---|
| |