Gene Aave_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1387 
Symbol 
ID4666159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1521512 
End bp1521871 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content70% 
IMG OID639822581 
Productpeptidylprolyl isomerase 
Protein accessionYP_969752 
Protein GI120610074 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.719013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCA CCACCACCCC GTCCGGACTG CAGTACGAAG ACACCACCGT CGGCGAAGGC 
GCCGAGGCCA CCAGCGGCCA GCCGGTGCGC GTGCACTACA CCGGCTGGCT CTACAACGAC
GGCCAGCAGG GCGCGAAGTT CGATTCCAGC CGCGACCGCA ATGCCCCGTT CGAGTTCCAC
CTCGGCGCCG GCATGGTGAT CAAGGGCTGG GACGAAGGCG TGCAGGGCAT GAAGATCGGC
GGCCAGCGCA CGCTCATCAT CCCCGCCGCC CTGGGCTACG GCGCGCGCGG CGCGGGGGGC
GTGATCCCGC CGAACGCCAC GCTGAAGTTC GACGTGGAAC TGCTCGGCGT CGGCCGCTGA
 
Protein sequence
MAFTTTPSGL QYEDTTVGEG AEATSGQPVR VHYTGWLYND GQQGAKFDSS RDRNAPFEFH 
LGAGMVIKGW DEGVQGMKIG GQRTLIIPAA LGYGARGAGG VIPPNATLKF DVELLGVGR