| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1381 |
|---|
| Symbol | |
|---|
| ID | 4665984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1513745 |
|---|
| End bp | 1514566 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639822575 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_969746 |
|---|
| Protein GI | 120610068 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1806] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.744697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACACGC GCACCGTATT CTTCATCTCC GACGGCACCG GCATCACCGC CGAAACCTTC
GGCAACGCCA TCCTGGCGCA GTTCGACATC AAGCCGCGCC ATGTGCGCCT GCCCTTCATC
GACACCGAGG ACAAGGCCCA CCAGGCCGTG CGCCGCATCA ACCACACGGC CGAGCTGGAG
GGCAAGAAGC CCATCGTGTT CACCACGCTG GTCAACATGA GCGTGCTGCG CATCATCCAG
GAGAACTGCC AGGGCATGCT GCTGGACATG TTCGGCACCT TCATCCGCCC GCTGGAGGGC
GAACTCGGCA TCAAGTCGCT GCACCGCGTG GGCCGCTTCG CGGACGTGAG CCTGAGCAAG
GAATACACCG ACCGCATCGA GGCCATCAAC TTCAGCCTGG ACCACGACGA CGGCCAGAGC
CACCGCGACC TGAGCGGCGC GGACGTGATC CTGGTGGGCG TGTCGCGCAG CGGCAAGACC
CCCACCAGCC TCTACCTGGC CATGCAGTGC GGCCTGAAGG TGGCCAACTA CCCGCTCATC
CCCGAGGATT TCGAGCGCAA GCAATTGCCG CCCGCGCTGG AGCCGCACCG CAAGAAGATC
TTCGGCCTGA CCATCCTGCC CGAGCGGCTC TCGCAGATCC GCAACGAACG CCGGCCGGGC
TCGAAATACG CCGACCTCGC CAACTGCCGC CACGAGGTGG CCGAGGCCGA GGCGATGATG
CGGCGCTCGG GCATCCGGTG GCTCTCGACC ACCACGAAGA GCATCGAGGA GATCGCGACG
ACGATCCTGC AGGAGGTGCG GCCGGAGCGG CTGGTGTATT GA
|
|---|
| Protein sequence | MHTRTVFFIS DGTGITAETF GNAILAQFDI KPRHVRLPFI DTEDKAHQAV RRINHTAELE
GKKPIVFTTL VNMSVLRIIQ ENCQGMLLDM FGTFIRPLEG ELGIKSLHRV GRFADVSLSK
EYTDRIEAIN FSLDHDDGQS HRDLSGADVI LVGVSRSGKT PTSLYLAMQC GLKVANYPLI
PEDFERKQLP PALEPHRKKI FGLTILPERL SQIRNERRPG SKYADLANCR HEVAEAEAMM
RRSGIRWLST TTKSIEEIAT TILQEVRPER LVY
|
|---|
| |