Gene Aave_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1376 
Symbol 
ID4666140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1507503 
End bp1509071 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content69% 
IMG OID639822570 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_969741 
Protein GI120610063 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3634] Alkyl hydroperoxide reductase, large subunit 
TIGRFAM ID[TIGR03140] alkyl hydroperoxide reductase, F subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.300362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACG ACCAACTCAA ATCCCAACTT TCCGCCTATC TGGAGCGCGT GACGCAGTCG 
TTCGAGATCG TGGCGTCGCT GGACGGCAGC GACACCTCGG CCCAGATGCG CGACCTGCTG
GAGACCATCC AGTCCCTGCG CAGCGACAGG ATCAGCCTGC GCACCGACGG CACCGACGCC
CGCAAGCCGT CCTTCACGCT GCAGCGCGCC GGCACGCAGA CGAGCCTGCG CTTCGCCGGC
CTGCCCCTCG GCCATGAATT CACCTCGCTC GTGCTGGCGC TGCTCTGGAC GGGCGGCCAC
CCGCCGAAGG TGGAGCAGGA CGTGATCGAG CAGGTGCAGG CGCTCGACGG CGACTTCGAT
TTCGAGGTGT ACATGAGCCT GACCTGCCAC AACTGCCCGG ACGTGGTGCA GGCGCTGTCG
CTCATGGCGA TCCTCAACCC CCGCATCCGC ACCACCGTGA TCGAGGGCGG CGCGTTCCAG
CAGGAAGTGA CCGACCGCGA GATCATGGCC GTGCCCATGG TCTTCCTCAA CGGCCAGGTG
TTCGGCTCCG GCCGCATGAC CATCGAGGAA ATCGTCGGCA AGCTCGACAC CGGCGCCGCG
AAGCGCGAAG CCGCCAAACT GTCCGCCAAG GAAGCGTTCG ACGTGCTGAT CGTCGGCGGT
GGTCCGGCCG GCGCCGCGGC GGCCGTCTAT GCCGCCCGCA AGGGCATCCG CATCGGCGTG
GCGGCCGAGC GCTTCGGCGG CCAGGTGAAC GACACGCTGG ACATCGAGAA CTACATCTCG
GTCAGCAAGA CCGATGGCCC CAAGTTCGCC GCCGCGCTGG AGCAGCACGT GCGCGACTAC
GAGGTGGACC TGATGAACCT GCAGCGTGCC CGCGCGCTCA AGCCCGCCGC CACCGAGGGC
GGCCTGATCG AGGTCGAGCT CGAGAACGGC GGCACGCTCT CGTCCCGCAC CGTGATCATT
TCCACCGGCG CGCGCTGGCG CAACATGAAC GTGCCGGGCG AGGAGCAGTA CCGCACCAAG
GGCGTGACCT ACTGCCCGCA CTGCGACGGC CCGCTCTTCA AGGGCAAGCG CGTGGCGGTG
ATCGGCGGCG GCAACTCCGG CGTGGAGGCC GCGATCGACC TGGCCGGCGT GGTGGCCCAC
GTCACCGTGC TGGAGTTCGC GGGCGAGCTG AAGGCCGACG CGGTGCTGCA GCGCAAGCTG
CGCAGCCTGC CGAACGTGGA CGTGATCCTC AACGCGCAGA CCACCGAGGT GAAGGGCGAC
GGCACCCGGG TGACCGGCCT GAGCTACAAG GACCGCACGA ACGACGAGCA CCATGTGCTC
GCCCTGGAAG GCATCTTCGT GCAGATCGGC CTGCTGCCCA ACACCGACTG GCTCAAGGGC
ACGGTGGACC TGTCGCGGTT CGGCGAGATC GTGGTGGACT CCCATGGCCG CACCAGCGTG
CCGGGCGTGT TCGCGGCCGG CGACTGCACC ACGGTGCCCT ACAAGCAGAT CATCATCGCG
GCCGGCGAGG GCGCGAAGGC GGCGCTGGGC GCGTTCGACC ACCTGATCCG CACGACGGCC
CCGGCCTGA
 
Protein sequence
MLDDQLKSQL SAYLERVTQS FEIVASLDGS DTSAQMRDLL ETIQSLRSDR ISLRTDGTDA 
RKPSFTLQRA GTQTSLRFAG LPLGHEFTSL VLALLWTGGH PPKVEQDVIE QVQALDGDFD
FEVYMSLTCH NCPDVVQALS LMAILNPRIR TTVIEGGAFQ QEVTDREIMA VPMVFLNGQV
FGSGRMTIEE IVGKLDTGAA KREAAKLSAK EAFDVLIVGG GPAGAAAAVY AARKGIRIGV
AAERFGGQVN DTLDIENYIS VSKTDGPKFA AALEQHVRDY EVDLMNLQRA RALKPAATEG
GLIEVELENG GTLSSRTVII STGARWRNMN VPGEEQYRTK GVTYCPHCDG PLFKGKRVAV
IGGGNSGVEA AIDLAGVVAH VTVLEFAGEL KADAVLQRKL RSLPNVDVIL NAQTTEVKGD
GTRVTGLSYK DRTNDEHHVL ALEGIFVQIG LLPNTDWLKG TVDLSRFGEI VVDSHGRTSV
PGVFAAGDCT TVPYKQIIIA AGEGAKAALG AFDHLIRTTA PA