Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1368 |
Symbol | |
ID | 4665412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1501029 |
End bp | 1501757 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639822562 |
Product | hypothetical protein |
Protein accession | YP_969733 |
Protein GI | 120610055 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0029518 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.177746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCGT CCTTCCGCCC CTGGGCCACC GCCCTCTTCG CCGCCTGCGC CGCCTGCGCC GCCGCAGGTG CCCAGGCCCA CCAGGTGTGG CTCGAAGCCG GCAACGGCCA GGCACGGCTG CAGTTCGGCG AATATGCCGA CAACCTGCTC GAGAAATCGC CGGGCGCGCT GGACAAGTTC CAGGGCATTC CGGTGCTGCA GGCCCATGCG CCGGGTGCGG CTTCGGCCAC GCCCGTGGAA GGCCGGCGCA CCGCCACGGC CTTCGCCTAC GCATTGCCCG GCGCCGCCGA GACGCTGTTC GCGGAAGCCC CCTACCCGGT GATCGACCGC AGCAAGGGCG GCAAGCCCGC GCTGCTCTGG CGCCCCGCCG CGCGCTGGGT CGCGGACCTG TCCCGCCCCG TCGCGGCCAC GGCGCCGCTG GACGTGGTGC CTACGGGCCG CGCGGGCGAA CTGCGCGTGG TGTTCAACGG CCAGCCGCTG CCCAAGGCCC AGGTGACGCT GGCCGCGCCC TCCGGCTGGG CCCGCGAGGC CGTGACCGGA GCGGACGGCA CGGTGCGGTT CGCCCTGCCG TGGAAAGGCC AGTACGTGGC CGAGGTGAAG CACTCCGATG CGGCGGCCGG CGAGCGCAAT GGCGAGAAGT ACGGCGAGAC GGCCTACCTC ACCACGCTCA CCTTCGCCCA GGCCGAGGGC ATGGAATCTC CCGCCCTGCC GGCCGCCCCG GCGCGCTGA
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Protein sequence | MPSSFRPWAT ALFAACAACA AAGAQAHQVW LEAGNGQARL QFGEYADNLL EKSPGALDKF QGIPVLQAHA PGAASATPVE GRRTATAFAY ALPGAAETLF AEAPYPVIDR SKGGKPALLW RPAARWVADL SRPVAATAPL DVVPTGRAGE LRVVFNGQPL PKAQVTLAAP SGWAREAVTG ADGTVRFALP WKGQYVAEVK HSDAAAGERN GEKYGETAYL TTLTFAQAEG MESPALPAAP AR
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