| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1364 |
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| Symbol | |
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| ID | 4669411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1494072 |
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| End bp | 1495574 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639822558 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_969729 |
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| Protein GI | 120610051 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0424146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGT TTCCCCACTG GTATTCCCTT TCCCGGCTGG CGCCGCTGGC CGCGGCCCTG
GCGCTGGCCG GATGCATGAG CGCTCCGGCG GTGCCGGAGC ATGCCGGCGT GGCCGTGCCG
GCCACGTTCA GCGAAGCGGC CGGCGCCCCC TCGTGGACCA CGGCGCCGCC CGCCGAGGCG
CAGCCCCGCG GCACGTGGTG GCTGGGCTTC CGCGACCCGG TGCTGGACGA TCTGGTGCAG
CGCGCCGGCA GCGGCAACAC CAGCGTGCAG GAGGCCGCCG CCCGGCTGGC CGAAGCGCGG
GCGCTGCTGC GCTCCGCCGA TGCCAGCCGC GCGCCGCAAC TGGGTGCCTC CGCCGGCGTG
GCGCGGCAGG CCGGCGCCAA CACGGCCACG GGCGGTCCGG TGCCGGCCAC GCTGGCCACG
GCGGGGCTGA ACGTGTCCTA TGAGCTGGAC CTGTTCGGCC GCCTGTCGCA GGCCAGCGAG
GCCGCGCGGC TCGATGCCCG CTCGCGCGAG GCACTGCTCC AGAGCACACG CCTGATGGCG
CAGGCCGACA CCGCCCAGGC CTACCTGCAA CTGCGCTCGG TGCAGGCCGA GCAGGCCCTG
GTGCAGGAGG GGCTGGCCGC CTACCGCGAC ACCCTGCGCC TGACCGAGCG CCGCTACCGG
GCCGGCGACG TGGCCGAGCT GGATGTGGCG CGCGTGCAGG CCGAGGTGGC CGCCACCGAA
TCCGATGCCC TCGCGCTGGA GCGCCAGCAG GCCGTGCTGA CCCATGCGCT GGCCCTGCTG
GTCGGCGAGG TGGCCACCGG CTTCACCGTG CCCCCCGCGG CCGGCGAAGC GGCGCTGCCC
GTCATTCCCG CCGGCGTGCC GGGCACGGTG CTGGCGCGCC GTCCGGACGT CTCGGCGGCG
CAGGCGGCCG TGCTGGCGGC GCAGGCCCGC GTGGGCGTGG CCCAGGCCGC GTGGTTCCCG
GCCGTCACGC TCACGGGCAA CGGCGGCTAT GCCTCGCCGG AACTGGGCGA CCTGTTCAAG
TGGTCGGCCC GCTCCTGGGG CATCGGTGCG CTGCTGTCGC TGCCGCTCTT CGACGGCGGC
CAGCGCCAGG CGCAGGAAGA CGGCGCCCGC GCCCGGCTGG AGGGCGCGCT GGCAGCCCAC
CGCGGCCAGG TGCTCACCGC CTTCCGCGAG GTCGAGGACC AGCTCAGCGC GCTGCGCCTG
CTGGCAGGGC AGGCCGAGGC CCAGGGCCGT GCCGTGCAGT CCGCGGCCCG TGCCACGCAA
CTGTCGGATT CGCGCTACCG CAACGGCATG GTGAGCCAGC TGGAGCTGCT CGACGCCCGC
CGCAGCGAGT TGCGCAACCG TCGGCAGGCC CTGCAGGTGC GCACCGCGCA GTACACGGCC
ACCGTCGGGC TGATCCGCGC GCTGGGCGGC GGCTGGGGCG ACAGCGGCAC GACTGCGCGG
GAAACGGACC GCCCGGTGGC CGGAAATGGT GAAAAATCCC GCAACTTGGG TAAATCGGGG
TAG
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| Protein sequence | MTMFPHWYSL SRLAPLAAAL ALAGCMSAPA VPEHAGVAVP ATFSEAAGAP SWTTAPPAEA
QPRGTWWLGF RDPVLDDLVQ RAGSGNTSVQ EAAARLAEAR ALLRSADASR APQLGASAGV
ARQAGANTAT GGPVPATLAT AGLNVSYELD LFGRLSQASE AARLDARSRE ALLQSTRLMA
QADTAQAYLQ LRSVQAEQAL VQEGLAAYRD TLRLTERRYR AGDVAELDVA RVQAEVAATE
SDALALERQQ AVLTHALALL VGEVATGFTV PPAAGEAALP VIPAGVPGTV LARRPDVSAA
QAAVLAAQAR VGVAQAAWFP AVTLTGNGGY ASPELGDLFK WSARSWGIGA LLSLPLFDGG
QRQAQEDGAR ARLEGALAAH RGQVLTAFRE VEDQLSALRL LAGQAEAQGR AVQSAARATQ
LSDSRYRNGM VSQLELLDAR RSELRNRRQA LQVRTAQYTA TVGLIRALGG GWGDSGTTAR
ETDRPVAGNG EKSRNLGKSG
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