| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1363 |
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| Symbol | |
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| ID | 4667467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1490812 |
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| End bp | 1494057 |
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| Gene Length | 3246 bp |
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| Protein Length | 1081 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639822557 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_969728 |
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| Protein GI | 120610050 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.01573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0165317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCT CCCGTTTCTT CATCGACCGC CCCATCTTCG CGGGGGTGCT GTCGGTGCTC
ATCTTCCTGG CGGGGCTGAT CGCCCTGCGG GCGCTGCCGA TCTCGGAGTA CCCCGAGGTG
GCGCCGCCCT CCGTCGTGGT GCGCGCCACC TACCCCGGCG CCAATCCCAA GGTGATCGCC
GAGACCGTGG CCACGCCGCT GGAGGAATCC ATCAACGGCG TGGAAGGCAT GCTCTACATG
GGCAGCCAGG CCACGACCGA CGGCGTGATG ACGCTCACCG TGACCTTCGC GCTGGGCACC
GACCCGGACA AGGCGCAGCA GCTCGTGCAG AACCGCGTCT CGCAGGCCGA GCCGCGCCTG
CCCGAGGAGG TGCGCCGCCT GGGCGTCACC ACGGTCAAGA GCGCGCCCGA CCTGACCATG
GTCGTGCACA TGGTCTCGCC CAACGGCCGC TACGACATCG ACTACCTGCG CAACTACGCC
GTGCTCAATG TCAAGGACCG GCTCGCCCGC ATCCCCGGCG TCGGGCAGGT GCAGATCTTC
GGCGGCGGCG ATTACTCCAT GCGCGCCTGG CTGGACCCGC AGAAGGTGGC GCAGCGCGGC
CTTTCCGCGG GCGACGTGGT GGCCGCCATC CGCGGGCAGA ACGTGCAGGC CGCCGCGGGC
GTGGTGGGAC AGTCACCCGG CCTGCCGGGC GTGGACATGC AGCTGTCGAT CAACGCCCGG
GGCCGCCTGG CCACGGTGGA AGAGTTCGGC GACATCATCG TCAAGACCGG CGCCGACGGG
GCCGTGACGC GCCTGCGCGA CGTGGCCCGG CTGGAGCTGG GCGCGGCCGA CTACTCGCTG
CGCTCGCTGC TCAACAACGA CCCGGCCGTG GGCATGGGCG TTTTCCAGGC GCCCGGCTCC
AACGCGCTCG ACATCTCGGC CAACGTGCGC GCCACCATGG CCGAACTGCA GAAGCACATG
CCCGAGGGCG TGGAGTTCCG CATCGCCTAC GACCCCACGC AGTTCGTGCG CGCCTCCATC
CAATCGGTCA TCCAGACCTT GCTGGAGGCC ATCGCGCTGG TGGTGATCGT GGTCATCCTC
TTCCTGCAGA CCTGGCGCGC CTCCATCATC CCGCTGCTGG CCGTGCCGGT GTCGGTGGTG
GGCACGTTCG CGGTGCTGCA TCTGCTGGGC TTCTCGATCA ACGCGCTGTC GCTCTTCGGG
CTGGTGCTGG CCATCGGCAT CGTGGTGGAC GACGCCATCG TGGTGGTGGA GAACGTCGAG
CGCAACATCG AGGCGGGCCT CACTCCACGC GAGGCCACCT ACCGCGCCAT GCGCGAGGTG
AGCGGGCCCA TCATCGCCAT CGCGCTGGTG CTGGTGGCCG TGTTCGTGCC GCTGGCCTTC
ATCAGCGGGC TCACGGGGCA GTTCTACCGC CAGTTCGCGG TGACCATCGC CATCTCCACG
GTGATCTCGG CGATCAACTC GCTCACGCTG TCGCCCGCGC TCAGCGCGTT GCTCCTGAAG
GGCCACCACG AGCCCAAGGA TGCGCTCACC CGTGGCATGG ACCGGGTGCT GGGCGGTTTC
TTCCGGCGCT TCAACCGCGT GTTCCACCGC GGCTCCGAGG CCTACAGCGG CGGCGTGCGC
CGCGTGATCG GCCGCAAGGC GCTGATGCTG GCCATCTACC TAGTGCTGGT CGGCGCGACC
TGGGGCCTCT TCAAGGCGGT GCCCGGCGGC TTCGTTCCCG CGCAGGACAA GCAGTACCTG
GTGGGCTTCG CGCAACTGCC CGACGGCGCC ACGCTGGACC GCACGGAAGA CGTCATCCGC
CGCATGGGCA AGATCGTGAA GAAGAACCCC AACGTGGAAG ACGCCATCGC CTTCCCGGGC
CTGTCGATCA ACGGCTTCAC CAACAGCTCC AACGCGGGCA TCGTGTTCGT CACGCTCAAG
CCCTTCGCCG AGCGCAGGCG CGCCGACCAG AGCGGCGGCG CCGTCGCGGG CCAGCTCAAC
CAGGCCTTCG GCAGCATCCA GGATGCGTTC ATCGCCATGT TCCCGCCGCC GCCGGTGGCG
GGGCTGGGCA CGACGGGCGG CTTCAAGCTG CAGATCGAGG ACCGAGCCTC CCTGGGCTAT
GGCGCCATGG ACGCGGCCGT GAAGGCCTTC ATGGCCAAGG CCTACCAGAC GCCGGAGCTG
GCGGGGCTGT TCACCAGCTG GCAGGTCAAC GTGCCGCAGC TGTACGCCGA CATCGACCGC
ACCAAGGCCC GCCAGCTCGG CGTTCCGGTG ACCGACATCT TCGAGACCCT GCAGATCTAC
CTGGGCAGCC TGTACGCCAA CGACTTCAAC CAGTTCGGCC GCACCTACAG CGTGCGCGTG
CAGGCCGATG CGCCCTACCG GGCGCGGGCG GAGGACGTGG GCCTGCTCAA GGTGCGCTCC
ACCACCGGAG AGATGGTGCC GCTGTCGGCG CTGATGAAGA TCGAGAACAG CTTCGGCCCC
GAGCGCGCCA TGCGCTACAA CGGTTTCCTC TCGGCCGACG TGAACGGCGG GCCCGCGCCC
GGCTTCTCGT CGGGCCAGGC GCAGGCCGCC GTCGAGCGCA TCGCCGCCGA GACGCTGCCG
CCGGGCATCT CCTTCGAGTG GACCGAACTC ACCTACCAGG AGATCCTGGC CGGCAATTCC
GCCGTGCTGG TGTTCCCGCT GGCCATTTTG CTGGTGTTCC TGGTGCTGGC CGCGCAGTAC
GAGAGCCTGA CGCTGCCCAT CGCCATCATC CTGATCGTGC CCATGGGTCT GATGGCCGCC
ATGGCCGGCG TGTGGCTCAC CCGCGGCGAC AACAACGTGT TCACCCAGAT CGGGCTGATC
GTGCTGGTGG GGCTGTCGGC CAAGAACGCC ATCCTGATCG TGGAGTTCGC CCGCGAGCTG
GAGTTCGCCG GCCGCACGCC CGTGCAGGCC GCCATCGAGG CCAGCCGCCT GCGGCTGCGC
CCCATCCTGA TGACCTCGCT GGCCTTCGTG ATGGGTGTGC TGCCCCTGGT GCTGTCCACC
GGCGCCGGCT CGGAGATGCG CAGTGCCATG GGCGTGGCGG TGTTCGCCGG AATGATCGGC
GTCACGGCTT TCGGCCTGTT CCTCACGCCG GTCTTCTACG TGGTCCTGCG CCGCCTGGCG
GGCAACCGGC CACTGCAGCA GCACGGCAGC CACGTGGCGC CGATCACCGA CGCCGAGCGG
GGCGCGCCGG GCCATGGGGC CTCGGCCCAG CCTGTGATCG CCGCACCGCG CGGCCGGCAC
GAATGA
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| Protein sequence | MNLSRFFIDR PIFAGVLSVL IFLAGLIALR ALPISEYPEV APPSVVVRAT YPGANPKVIA
ETVATPLEES INGVEGMLYM GSQATTDGVM TLTVTFALGT DPDKAQQLVQ NRVSQAEPRL
PEEVRRLGVT TVKSAPDLTM VVHMVSPNGR YDIDYLRNYA VLNVKDRLAR IPGVGQVQIF
GGGDYSMRAW LDPQKVAQRG LSAGDVVAAI RGQNVQAAAG VVGQSPGLPG VDMQLSINAR
GRLATVEEFG DIIVKTGADG AVTRLRDVAR LELGAADYSL RSLLNNDPAV GMGVFQAPGS
NALDISANVR ATMAELQKHM PEGVEFRIAY DPTQFVRASI QSVIQTLLEA IALVVIVVIL
FLQTWRASII PLLAVPVSVV GTFAVLHLLG FSINALSLFG LVLAIGIVVD DAIVVVENVE
RNIEAGLTPR EATYRAMREV SGPIIAIALV LVAVFVPLAF ISGLTGQFYR QFAVTIAIST
VISAINSLTL SPALSALLLK GHHEPKDALT RGMDRVLGGF FRRFNRVFHR GSEAYSGGVR
RVIGRKALML AIYLVLVGAT WGLFKAVPGG FVPAQDKQYL VGFAQLPDGA TLDRTEDVIR
RMGKIVKKNP NVEDAIAFPG LSINGFTNSS NAGIVFVTLK PFAERRRADQ SGGAVAGQLN
QAFGSIQDAF IAMFPPPPVA GLGTTGGFKL QIEDRASLGY GAMDAAVKAF MAKAYQTPEL
AGLFTSWQVN VPQLYADIDR TKARQLGVPV TDIFETLQIY LGSLYANDFN QFGRTYSVRV
QADAPYRARA EDVGLLKVRS TTGEMVPLSA LMKIENSFGP ERAMRYNGFL SADVNGGPAP
GFSSGQAQAA VERIAAETLP PGISFEWTEL TYQEILAGNS AVLVFPLAIL LVFLVLAAQY
ESLTLPIAII LIVPMGLMAA MAGVWLTRGD NNVFTQIGLI VLVGLSAKNA ILIVEFAREL
EFAGRTPVQA AIEASRLRLR PILMTSLAFV MGVLPLVLST GAGSEMRSAM GVAVFAGMIG
VTAFGLFLTP VFYVVLRRLA GNRPLQQHGS HVAPITDAER GAPGHGASAQ PVIAAPRGRH
E
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