| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1362 |
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| Symbol | |
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| ID | 4665936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1489523 |
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| End bp | 1490779 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639822556 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_969727 |
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| Protein GI | 120610049 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.168892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00389749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCGTCAT CCCAACCCGT TTCCCTCTTC TCGCCCGCGC GCCGCTGGTG GACCGCCGCC
GGCGCCGCAG CCGCCATCGC GGCCGGCGGC GGAGCCCTGT TCGGGCTGTC CGCCTCGCAC
GCCGAGGCGC CGGCCGCCGA CGCCGCGCCC CCGGCCGTGC CGGTGTCCGT CGCGGCCGTG
GTGCAGCAGG ACGTCGCGCT GTGGGACGAG TTCTCCGGCC GGCTGGAGGC CGTGCAGCGC
GTGGACATCC GCCCGCGCGT GGCCGGCGCC GTGCAGGCCG TGCACTTCCG CGAAGGCGCG
CTGGTGAAGC AGGGCGACCT GCTCTTCACC GTGGACCCCG CGCCCTACGC CGCGGAGGTG
GACCGGGCCG ACGCCCAGGT GGTGGCCGCC CAGGCGCGCC TGACCTATAC CCGCAGCGAA
ATGGAGCGCG CCACGCGCCT GTGGGAAGAG CACGCCATCG CCCAGCGCGA GCGCGACGAG
CGCGTGAATG CGCAGCGCGA AGCAGAGGCC AACCTGCGCG CCGCCCAGGC CGCGCTGCAG
ACGGCCCGGC TGAACCTGGG CTACACCCAG GTGCGCGCGC CGGTCGCGGG CCGCGTGGGC
CGCATCGAGG TCACCGTGGG CAACCTGGTG GGTTCCGGGG CCGGTGCGCC GGTGCTGACC
ACGCTGGTGT CGGTGAGCCC GATCTACGCG AGCTTCGATA CCGACGAGCA GATCGTGGCA
CGCGCGCTGG AGGGCCTGCG CTCCGGCCAG AGCGCCCGCG CCCTCATCGA GCGCATTCCC
GTGCAGATGG GCACGGGCAC GGCCGGCGGC ACGCCGTATG CGGGCCATCT GCAGCTCATC
GACAACCAGG TGGATGCGAG GAGCGGCACC GTGCGCGTGC GCGCCGTTTT CGACAACGCC
GACGGCGCGC TCATGCCGGG CCAGTTCGCC CGCATCCGCG TGGGCCGGGC GAAGAGCACC
CCGGCCGTGC TGATCAACGA GCGTGCCGTG GGCACGGACC AGAGCAAGAA GTTCGTGATG
GTGGTGGGCG AGGGCAACAA GGCCGAATAC CGCGAGGTGC AGCTGGGCGC GCCGGTCGAT
GGCCTGCGCG TCGTCACCTC GGGCCTGAAG GCGGGCGAGC GCATCGTCGT CAACGGCCTG
CAGCGCGTGC GCCCCGGCGC CGTGGTCGCA CCGCAGGACG TGCCCATGAC CGCCAAGTCC
GAACTGGGCG GCGAGGGCGC GCAGGCGCGT GCCGCCGCCC GCCAGCCCGC AGCCTGA
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| Protein sequence | MPSSQPVSLF SPARRWWTAA GAAAAIAAGG GALFGLSASH AEAPAADAAP PAVPVSVAAV
VQQDVALWDE FSGRLEAVQR VDIRPRVAGA VQAVHFREGA LVKQGDLLFT VDPAPYAAEV
DRADAQVVAA QARLTYTRSE MERATRLWEE HAIAQRERDE RVNAQREAEA NLRAAQAALQ
TARLNLGYTQ VRAPVAGRVG RIEVTVGNLV GSGAGAPVLT TLVSVSPIYA SFDTDEQIVA
RALEGLRSGQ SARALIERIP VQMGTGTAGG TPYAGHLQLI DNQVDARSGT VRVRAVFDNA
DGALMPGQFA RIRVGRAKST PAVLINERAV GTDQSKKFVM VVGEGNKAEY REVQLGAPVD
GLRVVTSGLK AGERIVVNGL QRVRPGAVVA PQDVPMTAKS ELGGEGAQAR AAARQPAA
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