| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1357 |
|---|
| Symbol | |
|---|
| ID | 4668925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1484890 |
|---|
| End bp | 1486032 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639822551 |
|---|
| Product | adenosylhomocysteinase |
|---|
| Protein accession | YP_969722 |
|---|
| Protein GI | 120610044 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0499] S-adenosylhomocysteine hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.361298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0210902 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCCA AAGCATTCTT CCAGGCGGTT CTGGACAGCA GCGTTCCCAG GCGGGCGGGC
AAGCTGGTCC TCGTGACCCA CATCGTTCCC GGGAGCGAGA ATTTCGTCCT CGGCATCCAC
GAACGCCTGC CCCTGGCGGC GGTCATTCCC AAGCCCAGTT CCCTGCACGA GCCCACCTGC
CGCGTGATCG AGGAGCATGT ACCGGTGATC CACTACACGC GGGACAGGAT CCAGCAGAAC
GCGCTCGGCT TCATTGCGCA CCTGCGCAGC CTGATCGGGG AGGAGCCTTT CGCGGCCATC
GATACCGGGG GCTATTTCTC GAGCATCCTG GCCGCCCTGA AAAAGGCATT TCCCTCGCAA
CTGGTGGGCA TCGTCGAGGA CACCGAGAAC GGACACCAGA AGTACGACGC CGCACTGCGC
AGCATCCGGG CGGGCGGGGG CGCCATGTTT CCCTGTCCCG TCATGTCCGT GGCCAGGAGC
AAGCTCAAGG AGCCGGAGGA TTTCCTGGTC GGCCAGGCCA TCACGTTTTC CGCCGAGGCC
CTGCTGCGGG AACTGGGGAA CATCCTGACC GGCCGCAGGG CGCTGGTACT GGGCTACGGG
AAGATCGGAT CGAGCATTGC CCGGCACCTG CATGCCAAAG GCGTTCGCGT CGACGTGTAC
GACACGAACC CGATCCGCCA GGTGCTGGCC CTGGCGCACG GCTACCACAC CGGGCCGAAG
CACGAACTTT TGAGGACGGC GGAACTCATT TTCTGCGCGA CCGGCAACCG GTCCATCGGA
ACGTCCGACC TGGGCGCCAT CCGGCGCGAT GCCTACATCT TCACCGCCAC GTCGGCCGAC
GACGAGATCG AGAACCACCA GGACATGATC GCCAGCGCGA GCCCCGGCGG GCACAGGCAC
GTGCTGCAGG TGAACGCGCA GGGCAACCAG TTCTTCCTCT GCAACGAGGG CAAGTCGGCC
AATTTCATGC ACGGAGGCGT GGTCGGGCCC TTCATCGACC TCGTGCAGGC CGAGCTGCTC
TTCGCGCTCT CCAGGATCGG CGACGCCCCC CGGGACCGGG TGGTGGAACT GGGCGACGAT
GCGAAGAGAT TCATTTCCGA GCTGTGGATC ACGCGCTTTT CTCGACAGGG CATGGTCCAT
TGA
|
|---|
| Protein sequence | MDSKAFFQAV LDSSVPRRAG KLVLVTHIVP GSENFVLGIH ERLPLAAVIP KPSSLHEPTC
RVIEEHVPVI HYTRDRIQQN ALGFIAHLRS LIGEEPFAAI DTGGYFSSIL AALKKAFPSQ
LVGIVEDTEN GHQKYDAALR SIRAGGGAMF PCPVMSVARS KLKEPEDFLV GQAITFSAEA
LLRELGNILT GRRALVLGYG KIGSSIARHL HAKGVRVDVY DTNPIRQVLA LAHGYHTGPK
HELLRTAELI FCATGNRSIG TSDLGAIRRD AYIFTATSAD DEIENHQDMI ASASPGGHRH
VLQVNAQGNQ FFLCNEGKSA NFMHGGVVGP FIDLVQAELL FALSRIGDAP RDRVVELGDD
AKRFISELWI TRFSRQGMVH
|
|---|
| |