| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1346 |
|---|
| Symbol | |
|---|
| ID | 4666315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1474963 |
|---|
| End bp | 1475421 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639822540 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_969711 |
|---|
| Protein GI | 120610033 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00288796 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.104373 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCT ACGACAAACT CGCCGCCCTG AACATCACCC TCCCGCCCGT CGCCACGCCG
GCCGCGGCCT ATGTGCCCTA TGTGCAGACG GGCAACCTCG TCTTCCTCAG CGGCCACATC
GCTCGCAAGG ACGGCAAGCC GTGGGTGGGG CAGTTCGGCC GCGACATCGC GACGGAAGAC
GGCAAGGCCG CGGCACGCGC CGTGGCGATC GACCTGATGG GCACGCTGCA TGCGGCCACG
GGCGGTGACC TGAACCGCGT GCAGCGCATC GTGAAGGTGA TGAGCCTGGT GAACTCCACG
GGCGACTTCA CCGAGCAGCA CCTGGTGACC AACGGCGCCA GCGAGCTGCT GGGCGAAGTG
TTCGGCGACA AGGGCAAGCA CGCGCGCAGC GCCTTCGGCG TGGCGCAGAT CCCCATGGGT
GCCTGCGTGG AGATCGAGCT GATCGCCGAA CTGGCCTGA
|
|---|
| Protein sequence | MSIYDKLAAL NITLPPVATP AAAYVPYVQT GNLVFLSGHI ARKDGKPWVG QFGRDIATED
GKAAARAVAI DLMGTLHAAT GGDLNRVQRI VKVMSLVNST GDFTEQHLVT NGASELLGEV
FGDKGKHARS AFGVAQIPMG ACVEIELIAE LA
|
|---|
| |