| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1340 |
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| Symbol | |
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| ID | 4667869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1464961 |
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| End bp | 1466943 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639822534 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_969705 |
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| Protein GI | 120610027 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.205803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.718893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCA AACCCTCTTC CGTTTCGCCC AGCGACTATT CCGAAGGTTC GATCCGCGTG
CTCAAGGGCC TGGAGCCCGT GAAGCAGCGG CCGGGCATGT ACACGCGCAC CGACAACCCG
CTGCACATCA TCCAGGAAGT GCTCGACAAT GCCGCCGACG AGGCCCTGGC CGGGCACGGC
AAGCGCATCA AGGTCACCCT GTTCGCCGAC GGCTCCGTCG GCATCGAGGA CGACGGGCGC
GGCATTCCGT TCGGCCTGCA CCCCGAGGAA AAGGCCCCGG TGATCGAGCT GGTCTTCACG
CGGCTGCACG CGGGCGGCAA GTTCGACAAG GGCAAGGGCG GCGCCTACAG CTTCTCGGGC
GGCCTGCACG GCGTGGGTGT CTCGGTCACC AACGCCCTGG CATTGCGCCT GGAGGCCACG
ACCCACCGCG ACGGACAGAT CGCGCGCCTC GTGTTCGAGG GCGGCGACGT CACCGAGCCG
CTCACGGCCC GGCCCCTGGC CGCGGGCGAG CGCCGCCAGG GCACCACGGT GCGTGTCTGG
CCGGACGGCA GGTATTTCGA ATCCACCGCG CTGCCGATGG GCGAGCTGGT CCACCTGCTG
CGCAGCAAGG CCGTGCTGAT GCCGGGCGTG ACGGTGTCGC TGGTCAACGA GAAGACGAAG
GAGACGCAGA CCTGGCAATA CAAGGGCGGC CTGCGCGACT ACCTGGGCCA GAGCCTGCCG
GCCGACCCGG TGATCCCGCT CTTCGAGGGC GAGGGCTATG CCGACCGGCA CAACGAGAGC
TTCGCCGAAG GCGAGGGCGC CGCATGGTGC GTGGGCTTCA CCGACGAGGG CGCGCCCGTG
CGCGAGAGCT ACGTCAACCT GATTCCCACC AGCGCGGGCG GCACGCACGA CGCGGGCCTG
CGCGACGGCC TGTTCCAGGC TGTGAAGAGC TTCATCGAGC TGCACTCGCT GCTGCCCAAG
GGCGTGAAGC TGCTGCCCGA GGACGTGTTC GCCCGCGCCT CGTACGTGCT CTCGGCCAAG
GTGCTGGATC CGCAGTTCCA GGGCCAGGTG AAGGAAAAAC TCAATTCGCG CGATGCCGTC
CGGCTGGTGT CGAGCTACGT GCGGCCCGCG CTCGAGCTGT GGCTGCACCA GCACGTGGAC
TACGGGCGCA AGCTCGCCGA ACTCGCCATC AAGGCCGCGC AGACCCGCCA GAAGGCCGGG
CAGAAGGTCG AGAAGAAGAA GGGCTCCGGC GTGGCCGTGC TGCCGGGCAA GCTCACCGAC
TGCGAAAGCC GCGACCTGTC GCACAACGAG GTATTCCTGG TGGAGGGCGA CTCCGCCGGC
GGCAGCGCCA AGATGGGCCG CGACAAGGAA TGCCAGGCCG TGCTGCCGCT GCGCGGCAAG
GTGCTCAACA CCTGGGAGGT GGACCGCGAC CGGTTGTTCG CCAACACCGA GATCCACGAC
ATCTCCGTGG CGCTGGGCGT GGACCCGCAC GGCCCGAACG ACACGCCGGA CCTCTCCGGC
CTGCGCTATG GCAAGGTCTG CATCCTGTCG GACGCCGACG TGGACGGCTC GCACATCCAG
GTGCTGCTGC TCACGCTGTT CTTCCGCCAC TTCCCCAAGC TGATCGAGGC GGGCCACATC
TACGTGGCGC GCCCGCCGCT CTACCGCGTG GACGTGCCGG CGCGCGGCAA GAAGCCGGCC
TCGAAGGTCT ATGCGCTGGA CGACGGCGAG CTGGAGGCCA TCCTCGACAA ATGCGCCAAG
GATGGCGTGG CGCGCGAGAA GTGCCAGATC AGCCGCTTCA AGGGGCTGGG CGAGATGAAC
GCCGAGCAGC TCTGGGAGAC CACGCTCAAC CCCGACACCC GCCGCCTGCT GCCCGTGCAG
CTGGGCGACC TGGGCTTCGC CGAAACCGAG GGCCTCATCA CCAAGCTCAT GGGCAAGGGA
GAGGCGGCCG CGCGGCGCGA GCTGATGGAA CTGCACGGCG ACGCCGTGGA AGTGGATATC
TGA
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| Protein sequence | MAAKPSSVSP SDYSEGSIRV LKGLEPVKQR PGMYTRTDNP LHIIQEVLDN AADEALAGHG
KRIKVTLFAD GSVGIEDDGR GIPFGLHPEE KAPVIELVFT RLHAGGKFDK GKGGAYSFSG
GLHGVGVSVT NALALRLEAT THRDGQIARL VFEGGDVTEP LTARPLAAGE RRQGTTVRVW
PDGRYFESTA LPMGELVHLL RSKAVLMPGV TVSLVNEKTK ETQTWQYKGG LRDYLGQSLP
ADPVIPLFEG EGYADRHNES FAEGEGAAWC VGFTDEGAPV RESYVNLIPT SAGGTHDAGL
RDGLFQAVKS FIELHSLLPK GVKLLPEDVF ARASYVLSAK VLDPQFQGQV KEKLNSRDAV
RLVSSYVRPA LELWLHQHVD YGRKLAELAI KAAQTRQKAG QKVEKKKGSG VAVLPGKLTD
CESRDLSHNE VFLVEGDSAG GSAKMGRDKE CQAVLPLRGK VLNTWEVDRD RLFANTEIHD
ISVALGVDPH GPNDTPDLSG LRYGKVCILS DADVDGSHIQ VLLLTLFFRH FPKLIEAGHI
YVARPPLYRV DVPARGKKPA SKVYALDDGE LEAILDKCAK DGVAREKCQI SRFKGLGEMN
AEQLWETTLN PDTRRLLPVQ LGDLGFAETE GLITKLMGKG EAAARRELME LHGDAVEVDI
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