Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1339 |
Symbol | |
ID | 4668942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1463598 |
End bp | 1464836 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639822533 |
Product | major facilitator superfamily transporter |
Protein accession | YP_969704 |
Protein GI | 120610026 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.627078 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCCG AAAACCCGAA GCTCTCCATG GCGCAGGTCC TGGCCTGCGG CGCGGCCGTC GTCACGCTCT CCATGGGCAT ACGCCACGGC TTCGGCCTGT GGCTGCAGCC GATCACGCAG GACATGGGCT GGACCCGCCA GACCTTCGCG CTCGCGCTCG CCGTGCAGAA CATCGCCTGG GGCCTGTTCG GCATCTTCGC GGGCATGGCG GCCGACCGCT TCGGAGCGTT CCGCGTGCTG ATCGCCGGGG CGGTGCTGTA TGCCTTCGGG CTGGCCGGCA TGGCGCTGTC GCCCACGCCC CTGCTGTTCG CCCTCACGGC CGGCGTGCTG ATCGGCGCGG CCCAGGCGGG CACCACCTAT GCCGTGATCT ACGGCGTGCT GGGCCGCCAG ATCGCGCCCG AGAAGCGCTC CTGGGCCATG GGCGTGGCCG CGGCCGCCGG CTCGTTCGGG CAGTTCCTGA TGGTGCCCGT CGAGGGCCAG TTGATCGCCC GCCTGGGATG GCAGGAATCG CTGCTCGCCC TCTCGGCCAT GGTGCTGCTC ATCGTGCCGC TGGCCTTCGG CCTGCGCGAG CCGGGCTTCG GCCGCCGGGC GGCAGGCGCC CCCGCCGCGC CGCGCAGCCA GACGGTGGGA GAGGCCCTGT CCGAAGCGCT GCGCTATCCC AGCTTCCTGC TGCTCACGGC CGGGTACTTC GTGTGCGGGT TCCAGGTGGT GTTCATCGGC GTGCACATGC CCAGCTACCT CAAGGACCAC GGCCTCTCGC CCCAGGTGGC GAGCTACGCG CTGGCCCTGA TCGGCCTCTT CAACGTCTTC GGCACCTACA TCGCCGGCAC CCTCGGCCAG CGCATGGCGC GCCGGCACAT CCTGGCCTTC ATCTATTTCG CCCGCGCCGT GGCGATCACC GTGTTCCTGC TCGCGCCGCT CACCCCCGTC TCGGTGTACG TGTTTTCCGC GGTCATCGGG TTCCTGTGGC TGTCCACCGT GCCGCCCACC AACGCCACGG TGGCACAGAT CTTCGGTGTG CAGCACCTCT CGATGCTGGG CGGGTTCGTG TTCTTCAGCC ACCAGATCGG CAGCTTCCTG GGCGTCTGGC TGGGCGGCTA CCTCTACGAC CGCACTGGCA GCTACGACGT GGTCTGGTAC CTCGCCATCG CCTTGGGGCT GGTGGCCGGC CTCATCAACC TGCCGGTGCG CGAAACGCCG ATCACGCGCG CCCCGGTCCG GACGGGCGCC GCCGCCTGA
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Protein sequence | MSSENPKLSM AQVLACGAAV VTLSMGIRHG FGLWLQPITQ DMGWTRQTFA LALAVQNIAW GLFGIFAGMA ADRFGAFRVL IAGAVLYAFG LAGMALSPTP LLFALTAGVL IGAAQAGTTY AVIYGVLGRQ IAPEKRSWAM GVAAAAGSFG QFLMVPVEGQ LIARLGWQES LLALSAMVLL IVPLAFGLRE PGFGRRAAGA PAAPRSQTVG EALSEALRYP SFLLLTAGYF VCGFQVVFIG VHMPSYLKDH GLSPQVASYA LALIGLFNVF GTYIAGTLGQ RMARRHILAF IYFARAVAIT VFLLAPLTPV SVYVFSAVIG FLWLSTVPPT NATVAQIFGV QHLSMLGGFV FFSHQIGSFL GVWLGGYLYD RTGSYDVVWY LAIALGLVAG LINLPVRETP ITRAPVRTGA AA
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