| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1318 |
|---|
| Symbol | |
|---|
| ID | 4669476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1446004 |
|---|
| End bp | 1446528 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639822512 |
|---|
| Product | hexapaptide repeat-containing transferase |
|---|
| Protein accession | YP_969683 |
|---|
| Protein GI | 120610005 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTCT ACGAACTCGA CGGCATTTCT CCCCGCGTGG CCGATTCGGC CTGGGTGGCG
GGCAGCGCGG AGGTGATGGG CAACGTGGTG CTCGGCGAGG ACGCCAGCAT CTGGTTCGGC
GCGGTGCTGC GCGGCGACAA CGAGACGCTC ACCATCGGCG CGGGCAGCAA CGTGCAGGAT
GGCAGCGTGC TCCATTCCGA CTTCGGCCAG CCGCTGACGC TGGGCGAACG CGTGACGGTG
GGCCACAAGG TCGTGCTGCA TGGCTGCACC GTGGGCGACG AGTCGCTCAT CGGCATCGGG
GCCGTGGTGC TCAATGGTGC GAAGATCGGC CGCAACTGCC TCGTCGGCGC GGGCGCGCTG
GTCACGGAAG GCAAGGAATT CCCGGACGGC TCGATGATAT TGGGCAGCCC GGCCAAGGCC
GTGAGGCAGC TCACGCCGGA ACAGATCGAA GGCCTGCGCA AGAGCGCACA GGTCTATATC
GCGAATGCCC GGCGTTTCCG GGCGGGCCTG CACCGCACGG GTTGA
|
|---|
| Protein sequence | MALYELDGIS PRVADSAWVA GSAEVMGNVV LGEDASIWFG AVLRGDNETL TIGAGSNVQD
GSVLHSDFGQ PLTLGERVTV GHKVVLHGCT VGDESLIGIG AVVLNGAKIG RNCLVGAGAL
VTEGKEFPDG SMILGSPAKA VRQLTPEQIE GLRKSAQVYI ANARRFRAGL HRTG
|
|---|
| |