Gene Aave_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1302 
Symbol 
ID4668272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1429874 
End bp1430731 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content72% 
IMG OID639822496 
Productalpha/beta hydrolase fold 
Protein accessionYP_969667 
Protein GI120609989 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.12311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGGG ACGACTTCAG CGCATTCGCC GAAGAGCAGG TCCTGCAGTT GCCCACCGCG 
CACGGCGGCC ACCTTCGCTA CCAGGACCGC GGCAGGGGCC CCGCCGTCCT GCTCGGCCAC
AGCTATCTGT GGAACTCCAC GATGTGGGAG CCCCAGATCC GCGCACTTTC GCGCTGCTAC
CGCGTGATCG CGCCGGATCT CTGGGGCCAT GGAGCGTCCG GCCCCTTGCC GCGCGGCACG
CACGATCTGC AGGCACTGGC CGGTCACATG CTGTCCATGC TCGATGCCTT GCAGATCGAC
GAGTTCGCGG TGGTCGGCCT GTCGGCCGGC GGCCTGTGGG GCGCGGAACT GGCACTGCTG
GCTCCCGAGC GGGTGCGCAG CCTGGTGCTC ATGGGCACCC GCCTGGGCGC GGAACCCGCA
GCGACGCACC GCCACTACGC AGGCCTGCTC GACGCGATCG AGGCCGCAGG ACGTGTCACC
CCGGCCCTGG CGCAGGCCAT CGTTCCGCTC TTCTTCCGCG CCGGCACGGA CATGGATGCC
GAGCATCCGG CGGCGTTCGC GCGCTGCCTG GCGTCGATGC CCACCGACCG GCTGCGCGAT
TCGATCGTCC CCCTGGGCCG GCTCCTGCTG GCGCGGCGCG ACGCGCCGGG TCAACTGGCG
GCGCTGGACC CGGGCACCAC GCTGATGATG TGCGGCGACG GCGATACCGC CTGCCCGCCC
CGCGGGATAC AGGATCTGGC GCACTCGCTG GGCTGCGATG CCGTGCTCGT GCCGGCCGCG
GGCCACATTG CGAACCTGGA CAACCCCGAA GCCGTCAACC ACCACCTGCT GCGGTGGCTG
GAGCGCACGC TGCGCTGA
 
Protein sequence
MAGDDFSAFA EEQVLQLPTA HGGHLRYQDR GRGPAVLLGH SYLWNSTMWE PQIRALSRCY 
RVIAPDLWGH GASGPLPRGT HDLQALAGHM LSMLDALQID EFAVVGLSAG GLWGAELALL
APERVRSLVL MGTRLGAEPA ATHRHYAGLL DAIEAAGRVT PALAQAIVPL FFRAGTDMDA
EHPAAFARCL ASMPTDRLRD SIVPLGRLLL ARRDAPGQLA ALDPGTTLMM CGDGDTACPP
RGIQDLAHSL GCDAVLVPAA GHIANLDNPE AVNHHLLRWL ERTLR