Gene Aave_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1297 
Symbol 
ID4667750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1423880 
End bp1424854 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content70% 
IMG OID639822491 
Producthypothetical protein 
Protein accessionYP_969662 
Protein GI120609984 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.12258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.997754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGTT TCTTGCAGCA TGTCCTGCAG CCCGCACGGG CCCGACGAAC TTTCCCACCC 
GACCGGAATC TGTTCATTTC GATGAAACGC TGGCCCCTTT TCTCCTCCCT CGCGCTCGCC
CTCGCAGTGA CGGCGGGCTG CGCCACCCTC GACGCGAAGC AGCGCGAATG GATCTTCCAG
CCCAGCGACC GGGCCTGGGG AGGCGCGCAA TCCACCGACG ACATGCAGGA CGTGTGGATC
GCGTTCGATT CGCGCGCCAC GGGCAAGGCG GAGAAACTCC ACGGGCTCTG GATGCCCTCG
GACCGGGCCG ATGCTCCCGT GCTGCTGTAC CTGCACGGCG CGCGCTGGAA CGTTTCCGGC
TCCGCCGGCA GGATCCGGCG CATGAACGAC ATGGGTTTCT CGGTGCTGGC GGTGGACTAC
CGCGGCTTCG GGCGCAGCAG CCCGGCCCTG CCCTCCGAGG CGACGGCCCT GGAAGACGCC
CGGGCGGCCT GGGACTGGCT CGCCGCGCGG GAGCCCCGGG CGCCGCGCTA CATCTTCGGC
CATTCGCTGG GCGGGGCGAT CGCCATCGAC CTGGCCGCCA TGGTGCCGGA CGAACAGGGC
ACCATCGTGG AGGGAACGTT CACCAACATT CCCGAGGTGG TGGCCACGTT CAAGTGGGGG
TGGCTGCCGA TCTCGGGCCT CATCACGCAG CGTTTCGAGT CGGTCCGCAA GGTGGCGCAC
ATCGGCTCGC CGCTGCTCGT GGTGCATGGC AGCGACGACA GCCTGATCCC GCCCACCCTG
GGCAAGCGGC TGTATGAAGC GGCCCAGGGG CCGAAGCGTT TCGTCCTGGT GGAGGGCGGC
ACCCACCACA GCACCAACAG CGTGGGCGAA GCGCAGTACC GCGAGGCGCT GGCGGACCTG
TTCCGCATCC CCGCCGGCCC GATGCCCGCG CGTGCGCCGG CGCAAAGGGC CACGGCCCCC
GGCTCCGCGG CCTGA
 
Protein sequence
MVRFLQHVLQ PARARRTFPP DRNLFISMKR WPLFSSLALA LAVTAGCATL DAKQREWIFQ 
PSDRAWGGAQ STDDMQDVWI AFDSRATGKA EKLHGLWMPS DRADAPVLLY LHGARWNVSG
SAGRIRRMND MGFSVLAVDY RGFGRSSPAL PSEATALEDA RAAWDWLAAR EPRAPRYIFG
HSLGGAIAID LAAMVPDEQG TIVEGTFTNI PEVVATFKWG WLPISGLITQ RFESVRKVAH
IGSPLLVVHG SDDSLIPPTL GKRLYEAAQG PKRFVLVEGG THHSTNSVGE AQYREALADL
FRIPAGPMPA RAPAQRATAP GSAA