Gene Aave_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1296 
Symbol 
ID4668589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1423369 
End bp1423848 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content73% 
IMG OID639822490 
ProductHxlR family transcriptional regulator 
Protein accessionYP_969661 
Protein GI120609983 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0218186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.682914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC GTGCCACCAT CCCCCATTCC CCGGAAGCAG GCTCGGGGCC GTCGCGCCCG 
CCGCCTCCAG CCTCCGGCGT CGAGGCGTCC CTCCCCCTGG CCGAACTGAT GCGCCGGGGC
GATGTGCTGT CGCCGGACTG CCCGGCGCGG GAGATCCTGC AGCACGTCAC GAGCCGCTGG
GGCGTGCTGG TGCTGGTGGC GCTCGACGAC GGCACACTGC GGTTCAGCGA GCTGCGGCGC
AAGGTGGGCG GCGTGAGCGA GCGCATGCTG GCGCAGACGC TGCAGGTGCT GGAGCGGGAT
GGTTTCGTGG AGCGCCGGGC CTATCCCGTC GTTCCGCCGC ACGTCGAGTA CCGCCTGACG
CCTCTGGGGC GCAAGGTCGG CCTGCATGTG CAGGCCCTGG CCGACTGGAT CGGCGGGCAC
CTGCCTGAGA TCCTGGCGGC ACGGGGGCAG GCCGCGGCCG CTGCCGTCGC AGGCGGCTGA
 
Protein sequence
MNLRATIPHS PEAGSGPSRP PPPASGVEAS LPLAELMRRG DVLSPDCPAR EILQHVTSRW 
GVLVLVALDD GTLRFSELRR KVGGVSERML AQTLQVLERD GFVERRAYPV VPPHVEYRLT
PLGRKVGLHV QALADWIGGH LPEILAARGQ AAAAAVAGG