Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1295 |
Symbol | |
ID | 4668564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1422418 |
End bp | 1423284 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639822489 |
Product | NmrA family protein |
Protein accession | YP_969660 |
Protein GI | 120609982 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0707892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.716609 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCA TCACCGGAGC CTCCGGCCAG CTCGGCCGCC TCGCCATCGA CGCGCTGCTG CGCAACGCTC CCGCCGGGGA CATCGTGGCG CTGGTGCGCA CCCCGGCCAA GGTGCAGGAC CTCGCCGAAC GCGGGGTCGT GGTGCGGCAG GCCGACTATG CCGATCCTGC CGGTTGGGAC GCGGCCCTGC AGGGCGTGCG CCGGCTGCTG CTGATCTCCG GCAGCGAAGT CGGGCAACGG GTGGCGCAGC ACCGCACCGT CATCGATGCC GCGCGACGCG CGGGCGTGGA ACTGCTGGCC TACACCAGCG TGCTGCGCGC GGACACCTCG GCCCTGGAGC TGGCCCGCGA GCACCGGGAC ACCGAAGCGC TGCTGCGGGA ATCCGGCGTG CCCCACGTGC TGCTGCGCAA CGGCTGGTAC ACCGAGAACT ACCTGGCCGG GGTGGGTGCC GCGCTGCAGC ACGGCGTGCT GCTGGGCAGC GCAGGCGAAG GCCGCATCGC ATCGGCAGCG CGGGCGGACT ATGCCGAAGC GGCCGCCGCG GTGCTGCAGG CACCGGACCA GGCCGGCAAG GTGCATGAAC TGGCGGGCGA CAGTGCGTAC ACGCTGGCGG AACTGGCTGC GGAAATCTCC CGCGCGTCGG GGCGGTCCAT CCCCTACCGC GACCTTCCCG AAGCGGAATA CGCCAGGGTC CTGGAAGGTG CGGGCCTGCC CGCGGCGTTC GCCGCGATCC TGGCGCAGTC CGATGCCGCG GCGGCGCAGG GAGCGCTCTT CGACGGCGGC GGCCAGCTGG CACGGCTCAT CGGCCGGCCG ACCACGCCCT GGCAGGGCCA GGCGGACGAA GCCGTCCGCG CCGCCATGCC GGGCTGA
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Protein sequence | MIAITGASGQ LGRLAIDALL RNAPAGDIVA LVRTPAKVQD LAERGVVVRQ ADYADPAGWD AALQGVRRLL LISGSEVGQR VAQHRTVIDA ARRAGVELLA YTSVLRADTS ALELAREHRD TEALLRESGV PHVLLRNGWY TENYLAGVGA ALQHGVLLGS AGEGRIASAA RADYAEAAAA VLQAPDQAGK VHELAGDSAY TLAELAAEIS RASGRSIPYR DLPEAEYARV LEGAGLPAAF AAILAQSDAA AAQGALFDGG GQLARLIGRP TTPWQGQADE AVRAAMPG
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