Gene Aave_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1295 
Symbol 
ID4668564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1422418 
End bp1423284 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content74% 
IMG OID639822489 
ProductNmrA family protein 
Protein accessionYP_969660 
Protein GI120609982 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0707892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.716609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCA TCACCGGAGC CTCCGGCCAG CTCGGCCGCC TCGCCATCGA CGCGCTGCTG 
CGCAACGCTC CCGCCGGGGA CATCGTGGCG CTGGTGCGCA CCCCGGCCAA GGTGCAGGAC
CTCGCCGAAC GCGGGGTCGT GGTGCGGCAG GCCGACTATG CCGATCCTGC CGGTTGGGAC
GCGGCCCTGC AGGGCGTGCG CCGGCTGCTG CTGATCTCCG GCAGCGAAGT CGGGCAACGG
GTGGCGCAGC ACCGCACCGT CATCGATGCC GCGCGACGCG CGGGCGTGGA ACTGCTGGCC
TACACCAGCG TGCTGCGCGC GGACACCTCG GCCCTGGAGC TGGCCCGCGA GCACCGGGAC
ACCGAAGCGC TGCTGCGGGA ATCCGGCGTG CCCCACGTGC TGCTGCGCAA CGGCTGGTAC
ACCGAGAACT ACCTGGCCGG GGTGGGTGCC GCGCTGCAGC ACGGCGTGCT GCTGGGCAGC
GCAGGCGAAG GCCGCATCGC ATCGGCAGCG CGGGCGGACT ATGCCGAAGC GGCCGCCGCG
GTGCTGCAGG CACCGGACCA GGCCGGCAAG GTGCATGAAC TGGCGGGCGA CAGTGCGTAC
ACGCTGGCGG AACTGGCTGC GGAAATCTCC CGCGCGTCGG GGCGGTCCAT CCCCTACCGC
GACCTTCCCG AAGCGGAATA CGCCAGGGTC CTGGAAGGTG CGGGCCTGCC CGCGGCGTTC
GCCGCGATCC TGGCGCAGTC CGATGCCGCG GCGGCGCAGG GAGCGCTCTT CGACGGCGGC
GGCCAGCTGG CACGGCTCAT CGGCCGGCCG ACCACGCCCT GGCAGGGCCA GGCGGACGAA
GCCGTCCGCG CCGCCATGCC GGGCTGA
 
Protein sequence
MIAITGASGQ LGRLAIDALL RNAPAGDIVA LVRTPAKVQD LAERGVVVRQ ADYADPAGWD 
AALQGVRRLL LISGSEVGQR VAQHRTVIDA ARRAGVELLA YTSVLRADTS ALELAREHRD
TEALLRESGV PHVLLRNGWY TENYLAGVGA ALQHGVLLGS AGEGRIASAA RADYAEAAAA
VLQAPDQAGK VHELAGDSAY TLAELAAEIS RASGRSIPYR DLPEAEYARV LEGAGLPAAF
AAILAQSDAA AAQGALFDGG GQLARLIGRP TTPWQGQADE AVRAAMPG