| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1294 |
|---|
| Symbol | |
|---|
| ID | 4669640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1421317 |
|---|
| End bp | 1422369 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639822488 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_969659 |
|---|
| Protein GI | 120609981 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0174445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.748301 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACTC CCCCTTCCCT GCCGGCCACC GGTGTGCCGG CACCCCACCT GCCCCGCGGA
GCGGCCGCTC CGGCGCTTCC TGCCTGCCTC GCGCTGGCAG GCCCCACCGC ATCGGGCAAG
ACGGCCGGGG CGCTGGCCCT GGCCCGCGCG CTCGCGCCGC ACCGGCCCGT GGAAATCGTG
AGCGTGGATT CGGCGCTGGT GTACCGCGGC ATGGACATCG GCACGGCCAA GCCGACGGCC
GCCGAGCAGG CGGCCGTGCC ACACCACCTG ATCGACATCC GCGATCCGCT GCAGCCCTAC
AGCGCGGCCG AATTCGTGGC CGACGCGCAG CGGCTCGTGC GCGAAATCCA GGCGCGTGGC
GCCCTGCCGC TGCTGGTGGG GGGGACGATG CTGTACTTCA AGGCGCTGTG GGACGGTATC
GACGACATGC CGCCGGCCGA CGCCGCCGTG CGGGCCCGAC TGGAAGCACA GGCCGCGGCC
GAAGGCTGGC CGGCCCTGCA CGCGGAACTG GCCCGCGTGG ATCCGCAGAC GGCGGCCCGG
CTCGCGCCCG GTGACAGCCA GCGCATCCAG CGGGCGCTGG AGGTCTGGCA CGTGTCCGGG
CGACCGCTGT CGAGTTTCCA CACCCGCTCC CGCGCGGCGG GCGAAGCGGC AGGCGCGGCA
CGCATGTCCA TGCCGCTCTT CTCCCTCGAG CCGCAGGACC GCGCCTGGCT GCACGGTCGG
ATCGCACAGC GCTTCGACGC CATGCTGGAC GAGGGCTTCG TGGAGGAGGT CCGGCGGCTG
CGCGCCCGCG GCGACCTGCA CCCGGACCTG CCCTCCATGC GGTGCGTCGG CTACCGGCAG
GCCTGGGAGG CGCTGTACGA AGAAGCGCGC ACCGGCCGGC TGCCGCTGGC GCAGTTGCGC
GAACGCGGCA TCGCGGCCAC CCGGCAGCTC GCCAAGCGGC AGGTCACCTG GCTGCGCAGC
ATGCCCTGGC GCCATGCGAT CGCCTGCGAC GCACCGGATG CCACGCAGCG GTGGGTGGCG
GCCGCGCTGC ATGCGCTCGG AGTTCCGGCA TGA
|
|---|
| Protein sequence | MSTPPSLPAT GVPAPHLPRG AAAPALPACL ALAGPTASGK TAGALALARA LAPHRPVEIV
SVDSALVYRG MDIGTAKPTA AEQAAVPHHL IDIRDPLQPY SAAEFVADAQ RLVREIQARG
ALPLLVGGTM LYFKALWDGI DDMPPADAAV RARLEAQAAA EGWPALHAEL ARVDPQTAAR
LAPGDSQRIQ RALEVWHVSG RPLSSFHTRS RAAGEAAGAA RMSMPLFSLE PQDRAWLHGR
IAQRFDAMLD EGFVEEVRRL RARGDLHPDL PSMRCVGYRQ AWEALYEEAR TGRLPLAQLR
ERGIAATRQL AKRQVTWLRS MPWRHAIACD APDATQRWVA AALHALGVPA
|
|---|
| |