Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1289 |
Symbol | |
ID | 4667153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1415495 |
End bp | 1416424 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639822483 |
Product | triple helix repeat-containing collagen |
Protein accession | YP_969654 |
Protein GI | 120609976 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.577985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAGA AACGCCCGGG CCGTCATTGG GCCGCCACCA CGCTGTGCTC CGTCCTCGCC CTGCATGCCG CAGGCGCGCT CGCCGCGGAC ATCACCGTCA CCCCCCCTGC GGGCGGCGGC TTCGTCGTCA AGGGGGGCAA CCAGGAGCGG CTTCGCGTGC AGGGCACGGG AGAGGTCTAT GTTCCCGGCC TGTCCTCGAC CGGCACGAGC AACACCCTGA CCTGCTATGA CGCGGGCACG GGACAGCTCA CCAGGTGCGC CCCCGGCGTG GGCGGCGGCG CGACGGGAGC CACGGGCCCC CTGGGCCCCA CCGGGGCGAC GGGCCCTGCC GGCGCCACGG GTGCGACCGG TGCCACCGGC GCGGCCGGCC CGACGGGCGC CACCGGGGTG ACCGGGGCCA CAGGACCCTC CGGAACAGGT GCTACCGGCG CCACGGGCCC GACAGGCGCC ACGGGCGCTA CCGGAGCCAC GGGACCGACC GGCCCGACGG GCGCCACGGG TGCAGAAGGA GCCACCGGGG CGACCGGCCC GACCGGCGCC ACGGGTGTGA CGGGCCCCCA GGGCACACAG GGCCCGCAGG GTATCCAGGG CATCCAGGGT GTTCAAGGCA ACACTGGAGC GACAGGTCCC ACCGGGGCCA CCGGGCCTGC AGGTACGACC GGCAATACCG GCGCGACCGG GGCCACGGGC CCGACGGGAA GCGTGGGAGC ACTGACCAAG ACCTCGGCCA ACGATGTATG CGGCGGCAGC GGACTCAAGG AAGTGACGGC CACCTGCAGC GTGGGCAACG CGGTTTCGGG TGGATGTCGC ACCGATGACC CTCTGGTGAA CCTGCTGACC CAGACCTACA AGAGTTCGGA CAACCAATGG AAATGTTCGT ACTCCTGCTC ATCCGCGGTA AGCATCACGG CGGAGGCGTA CTGCCAATAA
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Protein sequence | MPKKRPGRHW AATTLCSVLA LHAAGALAAD ITVTPPAGGG FVVKGGNQER LRVQGTGEVY VPGLSSTGTS NTLTCYDAGT GQLTRCAPGV GGGATGATGP LGPTGATGPA GATGATGATG AAGPTGATGV TGATGPSGTG ATGATGPTGA TGATGATGPT GPTGATGAEG ATGATGPTGA TGVTGPQGTQ GPQGIQGIQG VQGNTGATGP TGATGPAGTT GNTGATGATG PTGSVGALTK TSANDVCGGS GLKEVTATCS VGNAVSGGCR TDDPLVNLLT QTYKSSDNQW KCSYSCSSAV SITAEAYCQ
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