Gene Aave_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1289 
Symbol 
ID4667153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1415495 
End bp1416424 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content72% 
IMG OID639822483 
Producttriple helix repeat-containing collagen 
Protein accessionYP_969654 
Protein GI120609976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.577985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGA AACGCCCGGG CCGTCATTGG GCCGCCACCA CGCTGTGCTC CGTCCTCGCC 
CTGCATGCCG CAGGCGCGCT CGCCGCGGAC ATCACCGTCA CCCCCCCTGC GGGCGGCGGC
TTCGTCGTCA AGGGGGGCAA CCAGGAGCGG CTTCGCGTGC AGGGCACGGG AGAGGTCTAT
GTTCCCGGCC TGTCCTCGAC CGGCACGAGC AACACCCTGA CCTGCTATGA CGCGGGCACG
GGACAGCTCA CCAGGTGCGC CCCCGGCGTG GGCGGCGGCG CGACGGGAGC CACGGGCCCC
CTGGGCCCCA CCGGGGCGAC GGGCCCTGCC GGCGCCACGG GTGCGACCGG TGCCACCGGC
GCGGCCGGCC CGACGGGCGC CACCGGGGTG ACCGGGGCCA CAGGACCCTC CGGAACAGGT
GCTACCGGCG CCACGGGCCC GACAGGCGCC ACGGGCGCTA CCGGAGCCAC GGGACCGACC
GGCCCGACGG GCGCCACGGG TGCAGAAGGA GCCACCGGGG CGACCGGCCC GACCGGCGCC
ACGGGTGTGA CGGGCCCCCA GGGCACACAG GGCCCGCAGG GTATCCAGGG CATCCAGGGT
GTTCAAGGCA ACACTGGAGC GACAGGTCCC ACCGGGGCCA CCGGGCCTGC AGGTACGACC
GGCAATACCG GCGCGACCGG GGCCACGGGC CCGACGGGAA GCGTGGGAGC ACTGACCAAG
ACCTCGGCCA ACGATGTATG CGGCGGCAGC GGACTCAAGG AAGTGACGGC CACCTGCAGC
GTGGGCAACG CGGTTTCGGG TGGATGTCGC ACCGATGACC CTCTGGTGAA CCTGCTGACC
CAGACCTACA AGAGTTCGGA CAACCAATGG AAATGTTCGT ACTCCTGCTC ATCCGCGGTA
AGCATCACGG CGGAGGCGTA CTGCCAATAA
 
Protein sequence
MPKKRPGRHW AATTLCSVLA LHAAGALAAD ITVTPPAGGG FVVKGGNQER LRVQGTGEVY 
VPGLSSTGTS NTLTCYDAGT GQLTRCAPGV GGGATGATGP LGPTGATGPA GATGATGATG
AAGPTGATGV TGATGPSGTG ATGATGPTGA TGATGATGPT GPTGATGAEG ATGATGPTGA
TGVTGPQGTQ GPQGIQGIQG VQGNTGATGP TGATGPAGTT GNTGATGATG PTGSVGALTK
TSANDVCGGS GLKEVTATCS VGNAVSGGCR TDDPLVNLLT QTYKSSDNQW KCSYSCSSAV
SITAEAYCQ