Gene Aave_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1283 
Symbol 
ID4665934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1408697 
End bp1409902 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content65% 
IMG OID639822477 
Productputative substrate-binding periplasmic (pbp) ABC transporter protein 
Protein accessionYP_969648 
Protein GI120609970 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.154147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACG GAATCAACAA ACTGGCATTG GCGCTCGGCG CCGCAGGACT CTTCGCGGCC 
TCGGCCGCGC AGGCGCAGCA GGACGGCAAG GTGAAGATCG GCTTCATCAC CGACATGTCG
AGCCTGTACG CCGACGTGGA AGGCAAGAAC GGCGCGGTGG CGATCCAGAT GGCGATCGAC
GATTTCGGCG GCAAGGTGCT CGGCATGCCG ATCGAGCTGC TGACGGCGGA TCACCAGAAC
AAGGCGGACA TCGCGGCCAG CAAGGCGCGC GAGTGGATCG ACACGCAGGG CCTGACCATG
GTCTTCGGCG GCACCAACTC GGGCACGGCG CTGGCCATGG CCAAGGTGGC GCAGGAGAAG
AAGCGCGTCT TCATCAACAA CGGCGCGGCG ACCTCGGCGC TGACCAACGA ACAGTGCAGT
CCCTACACCG TGCACTACGC CTACGACACC GTGGCGCTCG CCAAGGGCAC GGGCGCGGCC
ATCGTGGACG CGGGGGGCAA GAGCTGGTTC TTCCTCACGG CGGACTATGC CTTCGGCCAT
GCGCTGGAGG CCGACACCTC CCGCGTGGTG AAGGAAAAGG GCGGCACCGT GGTGGGCTCC
GTGCGGCACC CGCTCAACGC GTCGGACTTC TCGTCCTTCC TGCTGCAGGC GCAGAACTCC
AAGGCGCAGA TCCTGGGCCT GGCGAACGCG GGCGGCGACA CCATCAACTC GATCAAGGCC
GCCAAGGAAT TCGGCATCGG CAAGAACATG AAGCTCGCCG GCCTGCTGAT CTTCTTCAGC
GACATCCACA GCCTGGGCCT GAAGACCACG GAGGGCCTGC AGTTCACCAC CAGCTGGTAC
TGGGACCTGA ACGACGAGAC CCGCAAGTTC GCCGACCGCT TCATGGAGAA GACCAAGCGC
CGCCCGACCG AGATCCAGGC GGCCGACTAC TCGGCCACCA TGAACTACCT CAAGGCCGTG
GAAGCCGCCA AGAGCATCGA GGCCGACAAG GTCATGGAGG CCTGGCGCGG CATGAAGATG
GACGACTTCT TCAACAGCGG CACGCTGCGC CCGGACGGCC GCTACGTGCA CGACATGTAC
CTCATGCAGG TGAAGACGCC CGCGGAATCC AAGGGCGCCT GGGACTACTA CAAGCTCGTG
AAGAAGCTGC CCGGCGACCA GGTGTTCGCC ACCAAGGCCG AGAGCAAGTG CGCGCTCTGG
AAATGA
 
Protein sequence
MANGINKLAL ALGAAGLFAA SAAQAQQDGK VKIGFITDMS SLYADVEGKN GAVAIQMAID 
DFGGKVLGMP IELLTADHQN KADIAASKAR EWIDTQGLTM VFGGTNSGTA LAMAKVAQEK
KRVFINNGAA TSALTNEQCS PYTVHYAYDT VALAKGTGAA IVDAGGKSWF FLTADYAFGH
ALEADTSRVV KEKGGTVVGS VRHPLNASDF SSFLLQAQNS KAQILGLANA GGDTINSIKA
AKEFGIGKNM KLAGLLIFFS DIHSLGLKTT EGLQFTTSWY WDLNDETRKF ADRFMEKTKR
RPTEIQAADY SATMNYLKAV EAAKSIEADK VMEAWRGMKM DDFFNSGTLR PDGRYVHDMY
LMQVKTPAES KGAWDYYKLV KKLPGDQVFA TKAESKCALW K