Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1283 |
Symbol | |
ID | 4665934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1408697 |
End bp | 1409902 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639822477 |
Product | putative substrate-binding periplasmic (pbp) ABC transporter protein |
Protein accession | YP_969648 |
Protein GI | 120609970 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.154147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACG GAATCAACAA ACTGGCATTG GCGCTCGGCG CCGCAGGACT CTTCGCGGCC TCGGCCGCGC AGGCGCAGCA GGACGGCAAG GTGAAGATCG GCTTCATCAC CGACATGTCG AGCCTGTACG CCGACGTGGA AGGCAAGAAC GGCGCGGTGG CGATCCAGAT GGCGATCGAC GATTTCGGCG GCAAGGTGCT CGGCATGCCG ATCGAGCTGC TGACGGCGGA TCACCAGAAC AAGGCGGACA TCGCGGCCAG CAAGGCGCGC GAGTGGATCG ACACGCAGGG CCTGACCATG GTCTTCGGCG GCACCAACTC GGGCACGGCG CTGGCCATGG CCAAGGTGGC GCAGGAGAAG AAGCGCGTCT TCATCAACAA CGGCGCGGCG ACCTCGGCGC TGACCAACGA ACAGTGCAGT CCCTACACCG TGCACTACGC CTACGACACC GTGGCGCTCG CCAAGGGCAC GGGCGCGGCC ATCGTGGACG CGGGGGGCAA GAGCTGGTTC TTCCTCACGG CGGACTATGC CTTCGGCCAT GCGCTGGAGG CCGACACCTC CCGCGTGGTG AAGGAAAAGG GCGGCACCGT GGTGGGCTCC GTGCGGCACC CGCTCAACGC GTCGGACTTC TCGTCCTTCC TGCTGCAGGC GCAGAACTCC AAGGCGCAGA TCCTGGGCCT GGCGAACGCG GGCGGCGACA CCATCAACTC GATCAAGGCC GCCAAGGAAT TCGGCATCGG CAAGAACATG AAGCTCGCCG GCCTGCTGAT CTTCTTCAGC GACATCCACA GCCTGGGCCT GAAGACCACG GAGGGCCTGC AGTTCACCAC CAGCTGGTAC TGGGACCTGA ACGACGAGAC CCGCAAGTTC GCCGACCGCT TCATGGAGAA GACCAAGCGC CGCCCGACCG AGATCCAGGC GGCCGACTAC TCGGCCACCA TGAACTACCT CAAGGCCGTG GAAGCCGCCA AGAGCATCGA GGCCGACAAG GTCATGGAGG CCTGGCGCGG CATGAAGATG GACGACTTCT TCAACAGCGG CACGCTGCGC CCGGACGGCC GCTACGTGCA CGACATGTAC CTCATGCAGG TGAAGACGCC CGCGGAATCC AAGGGCGCCT GGGACTACTA CAAGCTCGTG AAGAAGCTGC CCGGCGACCA GGTGTTCGCC ACCAAGGCCG AGAGCAAGTG CGCGCTCTGG AAATGA
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Protein sequence | MANGINKLAL ALGAAGLFAA SAAQAQQDGK VKIGFITDMS SLYADVEGKN GAVAIQMAID DFGGKVLGMP IELLTADHQN KADIAASKAR EWIDTQGLTM VFGGTNSGTA LAMAKVAQEK KRVFINNGAA TSALTNEQCS PYTVHYAYDT VALAKGTGAA IVDAGGKSWF FLTADYAFGH ALEADTSRVV KEKGGTVVGS VRHPLNASDF SSFLLQAQNS KAQILGLANA GGDTINSIKA AKEFGIGKNM KLAGLLIFFS DIHSLGLKTT EGLQFTTSWY WDLNDETRKF ADRFMEKTKR RPTEIQAADY SATMNYLKAV EAAKSIEADK VMEAWRGMKM DDFFNSGTLR PDGRYVHDMY LMQVKTPAES KGAWDYYKLV KKLPGDQVFA TKAESKCALW K
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