Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1282 |
Symbol | |
ID | 4669578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1407413 |
End bp | 1408633 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639822476 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_969647 |
Protein GI | 120609969 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0780459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.651455 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC ACCCACGCAC CATCGCGACC TTCAAGACCC TCGCCGTGGC GCTCGGCCTC GCCGGCCTGT GCGCCGCCCC GGTCGTGCAG GCGCAGGACG GCAAGGTGAA GATCGGCTTC ATCACCGACA TGTCGAGCCT GTATGCGGAT GTGGAGGGCA AGAACGGCGC GGTGGCGATC CAGATGGCGA TCGACGACTT CGGCGGCAAG GTGCTGGGCA TGCCGATCGA ACTGGTTTCC GCCGACCACC AGAACAAGGC CGACATCGCG GCCAGCAAGG CGCGCGAGTG GATCGACACG CAGGGGCTGA CCATGCTCTT CGGCGGCACC AACTCGGGCA CGGCCCTGGC CATGGCCAAG GTGGCGCAGG AGAAGAAGCG CGTCTTCATC GTGAACGGCG CCGGCACCTC GGCACTGACC AACGAGCAGT GCAGCCCCTA CACCGTGCAA TACGCCTACG ACACCGTGGC GCTGGCCAAG GGCACGGGCG GCGCGGTGGT GCAGCAGGGC GGCAGGGACT GGTTCTTCCT GACGGCCGAC TATGCCTTCG GCGCCGCGCT GGAGGCCGAC ACGGCCAAGG TGGTGAAGGA AAAGGGCGGC CGCGTGCTGG GCAGCGTGAA GCATCCGCTC AATGCGTCGG ACTTCTCGTC CTTCCTGCTG CAGGCGCAGA ACTCCAAGGC GCAGATCCTG GGCCTGGCCA ACGCGGGCGG CGACACCATC AACGCCATCA AGGCCGCGCG CGAGTTCGGC ATCAACAAGA GCATGAAGAT GGCGGGGCTG CTCGTGTTCC TGACGGACAT CCACAGCCTG GGCCTGAAGA ACACGGAAGG CCTGCTGCTC ACGACCAGCT GGGACTGGAA CCTCGACGAC AAGACGCGCG CCTTCGGCCG CAAGTTCTTC GCCAAGACCA AGCGCATGCC CACGGACATC CAGGCGGCCG ACTATTCGGC CACCATGAAC TACCTCAAGG CGGTGGAAGC CGCCAAGAGC ACGGACGCCG ACAAGGTGAT GGAAAAGCTC AAGTCCACGC CCATCGACGA CTTCTACGCC AAGGGCAGCA TCCGCCCGGA CGGCCGCTTC GCGCACGACA TGTACCTGAT GCAGGTGAAG TCGCCCGCCG AATCCAAGGA GCCGTGGGAC TACTACAAGG TGGTCGCCAG GCTGCCCGCC GACCAGGTGT GGACCACCAA GGCCGAAAGC AAGTGCGCGC TCTGGAAGTG A
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Protein sequence | MKKHPRTIAT FKTLAVALGL AGLCAAPVVQ AQDGKVKIGF ITDMSSLYAD VEGKNGAVAI QMAIDDFGGK VLGMPIELVS ADHQNKADIA ASKAREWIDT QGLTMLFGGT NSGTALAMAK VAQEKKRVFI VNGAGTSALT NEQCSPYTVQ YAYDTVALAK GTGGAVVQQG GRDWFFLTAD YAFGAALEAD TAKVVKEKGG RVLGSVKHPL NASDFSSFLL QAQNSKAQIL GLANAGGDTI NAIKAAREFG INKSMKMAGL LVFLTDIHSL GLKNTEGLLL TTSWDWNLDD KTRAFGRKFF AKTKRMPTDI QAADYSATMN YLKAVEAAKS TDADKVMEKL KSTPIDDFYA KGSIRPDGRF AHDMYLMQVK SPAESKEPWD YYKVVARLPA DQVWTTKAES KCALWK
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