| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1279 |
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| Symbol | |
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| ID | 4667231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1403474 |
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| End bp | 1405312 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639822473 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_969644 |
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| Protein GI | 120609966 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.173874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.343316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCG CCTCCGCACC GCACCGCCAT TCCGCCACGC CCCCGGGAAA TCCCTCGCGC
CCGCCGACAC GCGCCCTGGC GGGCCTGGTC CCCTTCCTGC GGCCGTATGC GGGCCGCATC
GCCCTGGCCC TGGTGTTCCT GGTGCTGGCA GCGGTTGCCA CGCTGGCCTT TCCCGTGGCC
CTGCGCTCGC TGATCGACGG CGGCCTGCTG CCCGGCGACC GCGGCGCGCA GGCCATGGCG
CTGCGGGAGC ACTTCGGGCT GCTGTTCGGC GTGGCCGTGG CGCTGGGCGT GTTCTCGGCG
GCACGTTTCT ACCTGGTCAG CTGGCTCGGC GAGCGGGTGA CCGCCGACCT GCGCAACGCC
GTTTACGCGC ACGTGCTGCG CCAGAGCCCG GCCTTCTTCG AAACCACGCA GACGGGCGAG
GTCCTCTCGC GCCTGACCAC CGACACCACG CTGGTGCAGA CCGTGGTGGG CTCCTCCCTG
TCCATGGGCC TGCGCAACGC GGTGATGGGA CTGGGCGCGC TGGGCATGCT GGTCTGGAGC
CATCCGCGCC TGATGGCCGT CGTGCTGCTG GGCATCGTGC TCGTGGTCGC TCCCACGGCC
TGGATCGGGC GGCGGGTGCG GCAGCTGTCG CGCGACAGCC AGGACCGGGT GGCGGACGCC
AGCGCGCTCG CGGGCGAAGT GCTGAATGCG ATTCCCGTGG TGCAGAGCCA CACGGCGGAG
GCCCGCGAAA GCGCGCGCTT CCAGGCCTCC ACAGCGCACG CCTTCGATGC CGCCGTGCGC
CGCAGCCGGG CGCGCGCCGC CCTGGTGGCC TTCATCATCG TCGCCAACGC GGGGTTGCTG
CTGTGGGGCC TGTACCGTGG CACACAGGCC GTGCTGGCCG GCGACATGTC GGCCGGGCAG
CTCGGCGAAA CCGTGATCTA CGTCATGCTG CTGGCCGGCG CGGTCGCCGT CCTGGGCGAG
GTCTATGGCG ACCTGCTGCG GGCGGCCGGC GCGACCGAGC GGCTGATGGA ACTGCTGGCG
GCCCGCCCCT CGATCGCCTC GCCGCCGGCC CCCGAGCCCT TGCCCGCAGC CAGCCAGGGC
CTGCGCGTGG ATTTCGAGCA TGTCGGTTTC CACTATCCCT CCCGGCCCGC GCAGCCCGCG
CTGCGGGACT TCGACCTGCA CATCCAGCCC GGCGAGACCG TGGCGCTGGT GGGCGCGAGC
GGCGCCGGCA AGACCACGGT CTTCCAGGTA CTGCAGCGCT TCTACGACGT GGATCCGGCG
CAGGACGGCG GCGGCCGCAT CCTGCTGGAC GGCCGGGACC TGCGCACGCT CGCGCTGGAC
GACTTCCGGG CCCGCATCGC CGTGGTGCCG CAGGATGCCG TGGTCTTCTC GGCCTCGGCC
CGCGAGAACA TCCGCTACGG CCGGCCCGGT GCCAGCGACG CCGAGGTGGA GGCCGCCGCG
CGTGCGGCCT TCGCCCACGA CTTCATCGCC GCCCTGCCGG AAGGCTACGG CACCTTCCTG
GGCGAGCGCG GCGTGCGCCT GTCGGGCGGG CAGCGCCAGC GCATCGCCAT CGCCCGCGCC
CTGCTCAAGG ACGCGCCATT GCTGCTGCTC GACGAAGCCA CGAGCGCGCT GGACGCCGAA
AGCGAACGCA TGGTGCAGGC CGCCCTGGAT GCCGCGCTGC ATTCGCAGGG CCGGCGCCGC
ACCACGCTGG TGATCGCCCA CCGCCTGGCC ACGGTCCAGA ACGCGGACCG GATCGTCGTG
ATGGAACAGG GCCGGGTGGT CGAGCAGGGG CGGCACGCGG AACTGATGCT GCGCGGCGGC
CCGTATGCCC GCCTCGCGGC GCTGCAGTTC ACGGCCTGA
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| Protein sequence | MPAASAPHRH SATPPGNPSR PPTRALAGLV PFLRPYAGRI ALALVFLVLA AVATLAFPVA
LRSLIDGGLL PGDRGAQAMA LREHFGLLFG VAVALGVFSA ARFYLVSWLG ERVTADLRNA
VYAHVLRQSP AFFETTQTGE VLSRLTTDTT LVQTVVGSSL SMGLRNAVMG LGALGMLVWS
HPRLMAVVLL GIVLVVAPTA WIGRRVRQLS RDSQDRVADA SALAGEVLNA IPVVQSHTAE
ARESARFQAS TAHAFDAAVR RSRARAALVA FIIVANAGLL LWGLYRGTQA VLAGDMSAGQ
LGETVIYVML LAGAVAVLGE VYGDLLRAAG ATERLMELLA ARPSIASPPA PEPLPAASQG
LRVDFEHVGF HYPSRPAQPA LRDFDLHIQP GETVALVGAS GAGKTTVFQV LQRFYDVDPA
QDGGGRILLD GRDLRTLALD DFRARIAVVP QDAVVFSASA RENIRYGRPG ASDAEVEAAA
RAAFAHDFIA ALPEGYGTFL GERGVRLSGG QRQRIAIARA LLKDAPLLLL DEATSALDAE
SERMVQAALD AALHSQGRRR TTLVIAHRLA TVQNADRIVV MEQGRVVEQG RHAELMLRGG
PYARLAALQF TA
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