Gene Aave_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1278 
Symbol 
ID4668332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1402934 
End bp1403428 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content72% 
IMG OID639822472 
Producthypothetical protein 
Protein accessionYP_969643 
Protein GI120609965 
COG category[S] Function unknown 
COG ID[COG5319] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.175666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.173505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGC TTGACCTGCA TTGCGCGCTC GACCATGCCT TCGAGGGATG GTTCGCATCC 
GAAGCGGATT TCCAGGACCA GCTTGCCCGT GGCCTGGTGG AGTGCCCCCT GTGCGGCAGC
CGGGAAATCC GCAAGATGCT CAGCGCGCCC CGGCTGAACC TGAAGTCTTC CGCCGGAGCG
TCCGTGGCGG TGCCCGGCAC TCCCGCGCAG GCGGGCCAGG CGATGCCGTC CGGCCCGTGC
GCTCCCGGGG CAGAGGGGCC CGCGTCCCGG GCCCTGCAGG CTGCGTGGCT GCGGCTCGCC
CGCCACGTGA TGGCCCATAC CGAGGATGTC GGAAGCCGCT TCGCCCAGGA GGCGCGCCGC
ATCCACGAGG GCGACGCCGA GGACCGGCCC ATCCGCGGCC AGGCCAGCGT GCAGGAGACG
GTGCAGCTGC TGGAGGAGGG CATCCCCGTG CTGCCGCTGC CCCTGCCTGC CGCCGCCAAG
GAAACCCTGC AATAG
 
Protein sequence
MKVLDLHCAL DHAFEGWFAS EADFQDQLAR GLVECPLCGS REIRKMLSAP RLNLKSSAGA 
SVAVPGTPAQ AGQAMPSGPC APGAEGPASR ALQAAWLRLA RHVMAHTEDV GSRFAQEARR
IHEGDAEDRP IRGQASVQET VQLLEEGIPV LPLPLPAAAK ETLQ