| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1259 |
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| Symbol | |
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| ID | 4667468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1383109 |
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| End bp | 1385385 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639822452 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_969624 |
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| Protein GI | 120609946 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.140666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGT TCAACAAGGT CACGAAAACG TTCCAGTGGG GCGACAAGAC CGTCGTCATG
GAAACGGGCG AGATCGCCCG CCAGGCCACC GGCGCCGTGC TGGTCAACAT CGACGACACG
GTCGTGCTGG CCACGGTCGT CGCCTCCAAG TCCGCCAAGC CCGGCCAGGA TTTCTTCCCC
CTGACGGTGG ACTACATCGA GAAGACGTAT GCCGCCGGCA AGATCCCCGG CAGCTTCTTC
AAGCGCGAAG CCAAGCCCAG CGAACTCGAG ACGCTGACCA GCCGCCTGAT CGACCGCCCG
ATCCGCCCGC TGTTCCCCGA AGGCTTCTAC AACGAAGTCC ACGTGGTCAT CCACACCGTG
TCGCTGAACC CCGAGGTCGA TGCCGACATC GCGGCCATGA TCGCCGTGAG CGCGGCCCTG
TCGGTGTCCG GCATTCCGTT CAACGGCCCG ATCGGCGCCG CGCGCGTGGG CTACATCAAC
GGCGAATACG TGCTGAACCC GGGCCAGACC GCCCGCAAGA ACTCGCAGAT GGACCTGGTC
GTCGCCGGCA CCGAAGCCGC CGTGCTGATG GTCGAGTCCG AGGCGCAGCA GCTGTCCGAA
GACATCATGC TGGGCGCCGT GGTGTTCGGC CACGAGCAGG GCCGCATCGC CATCAACGCC
ATCCATGAAC TGGTGCGCGA CGCCGGCAAG CCCGTGTGGG ACTGGCAGCC CGCCGCCAAG
GACGAGCCCT TCATCGCCAA GGTCACGCAA CTGGCCGAGG AGAAGCTGCG CGCCGCCTAC
CAGATCCGCA GCAAGCAGGC CCGCACGCAG GCCCTGCGCG AGGCGTCCGC TTCCGTGCTG
GAGTCGCTCA AGGCCGAAGG CGCCGATTTC GACGCGGTGA AGGTCGAGGC CCTCCTGTTC
GACATCGAAG CCAAGATCGT GCGCAGCCAG ATCCTGGCCG GCGAGCCCCG CATCGACGGC
CGCGACACGC GCACCGTGCG CCCCATCGAG ATCCGCAACT CCGTTCTGCC CCGCACGCAC
GGCTCCGCGC TGTTCACGCG CGGCGAGACG CAGGCGCTGG TGGTCTCCAC GCTGGGCACC
GAACGCGACG CGCAGCGCAT CGACGCGCTG GCCGGCGAGT TCGAAGACCG CTTCATGTTC
CACTACAACA TGCCTCCCTT CGCCACCGGC GAAGTGGGCC GCATGGGCTC CACCAAGCGC
CGCGAGATCG GCCACGGCCG CCTGGCCAAG CGCGCGCTGG TCGCCGTGCT GCCGACGAAG
GAAGAGTTCC CCTACACCAT CCGCGTGGTG TCCGAGATCA CCGAGTCCAA CGGTTCGTCC
TCGATGGCTT CCGTCTGCGG CGGCTGCCTG TCGATGATGG ACGCCGGCGT GCCGATGAAG
GCCCACGTGG CCGGCATCGC CATGGGCCTG ATCAAGGAAG ACAACCGCTT CGCGGTGCTG
ACCGACATCC TGGGCGATGA AGATCACCTG GGCGACATGG ACTTCAAGGT GGCCGGCACC
ACGGCCGGCA TCACCGCCCT GCAGATGGAC ATCAAGATCC AGGGCATCAC CAAGGAAATC
ATGCAGGTCG CCCTGGCCCA GGCCAAGGAA GCCCGCCTGC ACATCCTCGG CAAGATGCAG
GAAGCCATGG GCGAGGCCAA GACCGAGGTC TCCAGCTTCG CGCCCAAGCT CTACACGATG
AAGATCAACC CCGAGAAGAT CCGCGACGTG ATCGGCAAGG GCGGCGCGGT GATCCGCGCG
CTGACGGAAG AGACCGGCAC GCAGATCAAC ATCGACGAGG ACGGCACGAT CACCATCGCC
TCCACCGACA GCGCGAAGGC CGACGAGGCC AAGCGCCGCA TCGAGCAGAT CACGGCCGAG
GTCGAGATCG GCAAGATCTA CGAAGGCCCC GTGGTCAAGA TCCTGGACTT CGGCGCGCTG
ATCAACCTGC TGCCCGGCAA GGACGGCCTG CTGCACATCA GCCAGATCGC CCACGAGCGC
GTGGAAAAGG TGACCGACTA CCTGACCGAA GGCCAGGTCG TGAAGGTCAA GGTGCTCGAG
ACCGACGAGA AGGGCCGCGT GAAGCTGTCC ATGCGTGCGC TGCTGGACCG CCCGATGGGC
GACAGCGGCC GTCCGGCGCC CGCCGAGCGT GGCGAACGGG GTGACCGCGG TGACCGTGGC
GACCGCCCGG AACGCGGCGA GCGCCGTGAG CGCCGCGAAC CCGCCGGTGC AGACCAGCAG
CAACAGCAGC AGCAATCCAC TGGCGCGGGC GAGCACTCCG GCCAGATGGA TGCCTGA
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| Protein sequence | MSMFNKVTKT FQWGDKTVVM ETGEIARQAT GAVLVNIDDT VVLATVVASK SAKPGQDFFP
LTVDYIEKTY AAGKIPGSFF KREAKPSELE TLTSRLIDRP IRPLFPEGFY NEVHVVIHTV
SLNPEVDADI AAMIAVSAAL SVSGIPFNGP IGAARVGYIN GEYVLNPGQT ARKNSQMDLV
VAGTEAAVLM VESEAQQLSE DIMLGAVVFG HEQGRIAINA IHELVRDAGK PVWDWQPAAK
DEPFIAKVTQ LAEEKLRAAY QIRSKQARTQ ALREASASVL ESLKAEGADF DAVKVEALLF
DIEAKIVRSQ ILAGEPRIDG RDTRTVRPIE IRNSVLPRTH GSALFTRGET QALVVSTLGT
ERDAQRIDAL AGEFEDRFMF HYNMPPFATG EVGRMGSTKR REIGHGRLAK RALVAVLPTK
EEFPYTIRVV SEITESNGSS SMASVCGGCL SMMDAGVPMK AHVAGIAMGL IKEDNRFAVL
TDILGDEDHL GDMDFKVAGT TAGITALQMD IKIQGITKEI MQVALAQAKE ARLHILGKMQ
EAMGEAKTEV SSFAPKLYTM KINPEKIRDV IGKGGAVIRA LTEETGTQIN IDEDGTITIA
STDSAKADEA KRRIEQITAE VEIGKIYEGP VVKILDFGAL INLLPGKDGL LHISQIAHER
VEKVTDYLTE GQVVKVKVLE TDEKGRVKLS MRALLDRPMG DSGRPAPAER GERGDRGDRG
DRPERGERRE RREPAGADQQ QQQQQSTGAG EHSGQMDA
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