| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1249 |
|---|
| Symbol | |
|---|
| ID | 4667334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1370859 |
|---|
| End bp | 1373468 |
|---|
| Gene Length | 2610 bp |
|---|
| Protein Length | 869 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639822442 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_969614 |
|---|
| Protein GI | 120609936 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.748877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00497256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTCG ACAAACTCAC CACCAAGTTC CAGGAAGCCC TCGCCGATGC GCAATCGCTC
GCGCTGGGCA ATGACAACGC CTACATCGAA CCCGTGCACC TGCTGGCCGC CATGCTGCGG
CAGCAGGAAG GCCCGCGCGC GCTGCTGCAG CGGGCGGGCG CCAACGTGGC CGCCCTGCAG
ACGGCGGCCG AGAACGCCAT CAAGCGGCTG CCCCAGGTGC AGGGCCAGGA CCAGGTACAG
GTCGGGCCCG AACTGGGCCG CCTGCTGCAG GCCACCGAGA AGGAAGCGAT CAAGCGCGGC
GACCAGTTCA TCGCGAGCGA ACTCTTCCTG CTCGCGCTCG TGGACGGCAA GGGCGATACC
GCCCAGCTGG CGCGCGAGCA CGGCCTGACG CGCAAGAGCC TCGAAGCCGC GATCGACGCG
GTGCGCGGCG GCGCCCAGGT CAACAGCGCC GAGGCCGAGG GCCAGCGCGA GGCACTGAAG
AAGTACACGC TCGACCTCAC CGAGCGCGCC CGGGCCGGCA AGCTCGACCC GGTGATCGGC
CGCGACGACG AGATCCGCCG CGCCATCCAG GTGCTGCAGC GCCGCAGCAA GAACAACCCC
GTGCTCATCG GCGAGCCCGG CGTGGGCAAG ACCGCCATCG TGGAAGGCCT GGCGCAGCGC
ATCGTCGCGG GCGAGGTGCC CGAGAGCCTG AAGGGCAAGC GCGTGCTGTC GCTCGACATG
GCCGCGCTGC TGGCGGGCGC CAAGTACCGC GGCGAGTTCG AGGAGCGGCT CAAGGCCGTG
CTGAACGAAC TGGCCAAGGA CGAGGGCCAG ACCATCGTCT TCATCGACGA GCTGCACACC
ATGGTGGGCG CGGGCAAGGC CGAGGGCGCC ATGGACGCGG GCAACATGCT CAAGCCGGCC
CTGGCACGCG GCGAACTGCA CTGCGTGGGC GCGACCACGC TCGACGAGTA CCGCAAGTAC
ATCGAGAAGG ACGCCGCGCT GGAGCGGCGC TTCCAGAAGA TCCTCGTGGG CGAGCCCAGC
GTGGAGGCGA CCATCGCCAT CCTGCGCGGC CTGCAGGAGC GCTACGAGTT GCACCACGGC
GTGGAGATCA CCGACCCGGC CATCGTGGCC GCGGCCGAGC TATCGCACCG CTACATCACC
GACCGCTTCC TGCCCGACAA GGCGATCGAC CTCATCGACG AGGCCGCGGC CAAGATCAAG
ATCGAGATCG ACTCCAAGCC CGAGGCCATC GACAAGCTCG ACCGCCGGCT GATCCAGCTG
CAGATCGAGC GCGAGGCCGT GAAAAAGGAA AAAGACGAAG CCTCGCAGAA GCGCCTGGCG
CTGCTCGAGG AAGAGATCGG CAAGCTGCAG AAGGAAATCG CCGACCTGGA GGACATCTGG
ACCTCCGAGA AGGCGCAGGC CCAGGGCAGC CAGCAGGTGC GCGAGCAGGT CGAGAAGGTG
AAGCTGCAGA TCGAGGAGCT CAAGCGCAAG GGCGACTTCA ACAAGGTCGC GGAACTGCAG
TACGGCAGGC TGCCCGACCT GGAACGCCAG CTCAAGGAAG CCCAGGCCAA GGAAGAGGGC
ACCGACGGCA CCGCCACGCC CAACCGGCTG CTGCGCACCC AGGTGGGCGC CGAGGAGATC
GCCGAGGTCG TGAGCCGCGC CACGGGCATC CCTGTCTCGA AGATGATGCA GGGCGAGAAG
GACAAGCTGC TGCAGATGGA AGACAAGCTG CACGAGCGCG TGGTGGGCCA GGACGAGGCC
ATCGCGGCCG TGGCCAACGC CATCCGCCGC TCGCGCTCGG GCCTCGCCGA TCCGAACCGG
CCGATGGGCT CGTTCCTGTT CCTCGGCCCC ACGGGCGTGG GCAAGACCGA GCTGTGCAAG
GCGCTGGCGG GCTTCCTGTT CGACAGCGAG GAGCACCTCG TGCGCATCGA CATGAGCGAG
TTCATGGAGA AGCACTCCGT GGCCCGCCTG ATCGGCGCGC CGCCCGGCTA CGTGGGCTAC
GAGGAGGGCG GCTACCTGAC CGAGGCCGTG CGCCGCAAGC CCTACAGCGT GCTGTTGCTC
GACGAGGTCG AGAAGGCGCA CCCGGACGTG TTCAACGTGC TGCTGCAGGT GCTCGACGAC
GGCCGCCTGA CGGATGGCCA GGGCCGTACC GTGGACTTCA AGAACACGGT GATCGTGATG
ACGAGCAACA TCGGCTCGCA CCTGATCCAG GCGATGGTCG GCCAGGATGC GGACGACGTG
AAGGAAGCGG TCTGGGGGGA ACTCAAGAAC CATTTCCGGC CCGAATTCCT CAACCGGATC
GACGAAACGG TGGTGTTCCA TGCGCTCGAC GCGAAGAACA TCGAAGCGAT CGCACGCATC
CAGTTGCAAC TCCTGGAAGC GCGTCTGGCG AAAATGGACC TGCACCTGCA GGTGTCCCCC
GGCGCGTTGT CCGAGCTGGC CAAGGTGGGA TTCGATCCGG TGTTCGGCGC CCGCCCGCTC
AAGCGCGCGA TCCAGCAGCG CATCGAGAAT CCGCTCTCGA AGCTGCTGCT GGAAGGCCGC
TATCCGCCCA AGAGCGTGAT CCCGGTGAAC GTGGATCCCG TACAGGACCC TGGGGTCTTC
CATTTCGGCG AAGCGGCCGC GGTGGGGTAA
|
|---|
| Protein sequence | MRLDKLTTKF QEALADAQSL ALGNDNAYIE PVHLLAAMLR QQEGPRALLQ RAGANVAALQ
TAAENAIKRL PQVQGQDQVQ VGPELGRLLQ ATEKEAIKRG DQFIASELFL LALVDGKGDT
AQLAREHGLT RKSLEAAIDA VRGGAQVNSA EAEGQREALK KYTLDLTERA RAGKLDPVIG
RDDEIRRAIQ VLQRRSKNNP VLIGEPGVGK TAIVEGLAQR IVAGEVPESL KGKRVLSLDM
AALLAGAKYR GEFEERLKAV LNELAKDEGQ TIVFIDELHT MVGAGKAEGA MDAGNMLKPA
LARGELHCVG ATTLDEYRKY IEKDAALERR FQKILVGEPS VEATIAILRG LQERYELHHG
VEITDPAIVA AAELSHRYIT DRFLPDKAID LIDEAAAKIK IEIDSKPEAI DKLDRRLIQL
QIEREAVKKE KDEASQKRLA LLEEEIGKLQ KEIADLEDIW TSEKAQAQGS QQVREQVEKV
KLQIEELKRK GDFNKVAELQ YGRLPDLERQ LKEAQAKEEG TDGTATPNRL LRTQVGAEEI
AEVVSRATGI PVSKMMQGEK DKLLQMEDKL HERVVGQDEA IAAVANAIRR SRSGLADPNR
PMGSFLFLGP TGVGKTELCK ALAGFLFDSE EHLVRIDMSE FMEKHSVARL IGAPPGYVGY
EEGGYLTEAV RRKPYSVLLL DEVEKAHPDV FNVLLQVLDD GRLTDGQGRT VDFKNTVIVM
TSNIGSHLIQ AMVGQDADDV KEAVWGELKN HFRPEFLNRI DETVVFHALD AKNIEAIARI
QLQLLEARLA KMDLHLQVSP GALSELAKVG FDPVFGARPL KRAIQQRIEN PLSKLLLEGR
YPPKSVIPVN VDPVQDPGVF HFGEAAAVG
|
|---|
| |