| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1236 |
|---|
| Symbol | |
|---|
| ID | 4666558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1360580 |
|---|
| End bp | 1360957 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639822429 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_969601 |
|---|
| Protein GI | 120609923 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3737] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.681014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0120862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCC AGCCCGACCG CTCCGAAGCC CAGACCATCA GCGCCTACGG CGCGGACTGG
ATCGCGGTCG ATGGGGAAAA GCTCACGGGC AGCGTGGTGA TCGGCTCCCG GGGCGAGCGG
AGGGAATGGC AGTGCAACCG CTTCGAGGAC CTCACCGCCG AGCATTTCGC GCTGCTGGCG
GAACTCGACG CGGAAGTGGT CATCTTCGGC AGCGGTCAGC GCAACCGTTT CCCGCCACCG
GCGTGGCTGC GGCCCCTCAT GGCACGGCGC ATCGGCCTGG AAACCATGGA CACCCAGGCC
GCGTGCCGGA CGTACAACAT CCTGGCGGGG GAAGGCCGCC ACGTGGTCGC CGCGCTGCTG
CTGGAACCCA AGGCGTGA
|
|---|
| Protein sequence | MKFQPDRSEA QTISAYGADW IAVDGEKLTG SVVIGSRGER REWQCNRFED LTAEHFALLA
ELDAEVVIFG SGQRNRFPPP AWLRPLMARR IGLETMDTQA ACRTYNILAG EGRHVVAALL
LEPKA
|
|---|
| |