Gene Aave_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1235 
Symbol 
ID4666511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1359947 
End bp1360432 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content60% 
IMG OID639822428 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_969600 
Protein GI120609922 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0054816 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGATCG TTGTCAACAA ACCCCTCCCC GAATTCGAAG CCAACGCGAC CGGTGGCATC 
AAGGTCTCCA ACACATCGCA CCTCGGCCAG ATCCTGATCC TGTACTTCTA CCCCAAGGAC
AACACCCCCG GCTGCACCAC CGAGGCCATG CAGTTCCGCG ACAAGTACGA GGATTTCGCC
CAGGCCGGCG CCGCCGTGTT CGGCGTGTCG CGGGACAACA TGAAGTCCCA CGACGACTTC
AAGGAAAAGC TGGAACTGCC CTTCGAGCTC ATCGCCGACA CCGAAGAGAA GATGTGCCAC
ATGTTCGGCG TGGTCAAGAA CAAGATCATG TACGGCAAGA AGGTCAAGGG CATCGAGCGC
AGCACCTTCC TCATCGGCCC CGATGGCGTG CTGGTCCAGG AATGGCGCGG CCTCAAGGTG
CCCGGACACG TGGACGAGGT TCTCAAGGCC GTGAAGTCCA TCAAGGCCCT CAAGAAGGCG
GCGTAA
 
Protein sequence
MAIVVNKPLP EFEANATGGI KVSNTSHLGQ ILILYFYPKD NTPGCTTEAM QFRDKYEDFA 
QAGAAVFGVS RDNMKSHDDF KEKLELPFEL IADTEEKMCH MFGVVKNKIM YGKKVKGIER
STFLIGPDGV LVQEWRGLKV PGHVDEVLKA VKSIKALKKA A