Gene Aave_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1219 
Symbol 
ID4665114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand- 
Start bp1343400 
End bp1344530 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content67% 
IMG OID639822412 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_969584 
Protein GI120609906 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.294148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0152314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGT TGGTAGGGTT GGTCGGCTGG CGCGGCATGG TCGGCTCGGT CCTGATGGAG 
CGCATGGAGG CCGAGGGCGA TTTCGGCCTC ATCGAGCCGC TTTTCTTCTC CACCTCGAAC 
GCGGGCGGCA AGGCTCCGGC GCAGGCGAAG AACGAAACCA CGCTGCAGGA TGCGTTCGAC 
ATCAACGCCC TCAAGCGCTG CGACATCATC CTCACCGCCC AGGGCGGCGA CTACACGAGC 
GAAGTGTTCC CCAAGCTGCG CGATGCCGGC TGGAAGGGCC ACTGGATCGA CGCCGCCTCC 
ACGCTGCGCA TGAAGGACGA TGCCGTGATC GTGCTCGATC CGGTGAACAT GCCCGTCATC 
AAGGATGCAC TCGCCAAGGG CGGCAACAAC TGGATCGGCG GCAACTGCAC CGTGAGCTGC 
ATGCTGATGG GCGTGGGCGC GCTCTACAAG GCCGGCCTCG TCGAGTGGAT GAGCACCCAG 
ACCTACCAGG CGGCCAGCGG CGGCGGCGCG CAGCACATGC GCGAGCTGCT CACGCAGTAC 
GGCACGCTGA ATGCCGAAGT GCGCTCGCTG CTCGACGATC CGAAGAGCGC CATCCTGGAG 
ATCGACCGCA AGGTCATCGC CAGGCAGCGC AGCCTCTCCG AGGCCGAGAC CGCCAACTTC 
GGCGTGCCGC TGGGCGGCAG CCTGATCCCC TGGATCGACA AGGACCTGGG CAACGGCATG 
TCGAAGGAAG AGTGGAAGGG CATGGCCGAG ACCAACAAGA TCCTCGGCCA GGGCGAAGGC 
TTCGGCACCC AGGCCGTGCC GGTGGACGGC TTCTGCGTGC GCGTGGGCGC CATGCGCTGC 
CACAGCCAGG CACTGACCTT GAAGCTGAAG AAGCACGTGC CCGTGGCCGA CATCGAGGCC 
ATGATCGCCG CCGACAACGA GTGGGTGAAA GTGGTGCCGA ACACGCGCGA AGCCACGCTC 
CGTGACCTGA CGCCCGTCGC CGTGACCGGC ACCATGACCA TCCCGGTCGG CCGCATCCGC 
CAGCTCGCCA TGGGCCCGGA CTACATCGGC GCCTTCACCA TCGGGGACCA GCTGCTGTGG 
GGCGCCGCCG AGCCGCTGCG CCGCATGCTG CGCATCCTGC TGGACGCCTG A
 
Protein sequence
MSKLVGLVGW RGMVGSVLME RMEAEGDFGL IEPLFFSTSN AGGKAPAQAK NETTLQDAFD 
INALKRCDII LTAQGGDYTS EVFPKLRDAG WKGHWIDAAS TLRMKDDAVI VLDPVNMPVI 
KDALAKGGNN WIGGNCTVSC MLMGVGALYK AGLVEWMSTQ TYQAASGGGA QHMRELLTQY 
GTLNAEVRSL LDDPKSAILE IDRKVIARQR SLSEAETANF GVPLGGSLIP WIDKDLGNGM 
SKEEWKGMAE TNKILGQGEG FGTQAVPVDG FCVRVGAMRC HSQALTLKLK KHVPVADIEA 
MIAADNEWVK VVPNTREATL RDLTPVAVTG TMTIPVGRIR QLAMGPDYIG AFTIGDQLLW 
GAAEPLRRML RILLDA