| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1216 |
|---|
| Symbol | |
|---|
| ID | 4665087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1338581 |
|---|
| End bp | 1339351 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639822409 |
|---|
| Product | phosphoribosylanthranilate isomerase |
|---|
| Protein accession | YP_969581 |
|---|
| Protein GI | 120609903 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0135] Phosphoribosylanthranilate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0220609 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCGC CCATGCCTTC ATCCGCCCCT GACACGCCCC TGCCGGAAAG CCGGCGCGGC
GACGCTCCAG TTCCCCGCAC GCGCATCAAG ATCTGCGGCA TCACCCGCGA GCAGGACCTG
GACGCCGCCG TCCAGGCCGG AGCCGATGCG GTGGGATTCG TGCTGTATCC GAAGAGCCAG
CGCGCGGTGA CCGTGCAGCG CGCCGCCGCG CTCGCGCGCC GCCTGCCCCC CTTCGTCACG
CCCGTGCTCC TGTTCGTGAA TGCCGAAGCC GCCGAAGTGG CAGCCGCCTG CGACGAGATC
CCCGGCGCCA CCCTGCAGTT CCATGGCGAC GAAAGCCCCG CGGCCTGCCA GGAGGCCGCG
GGCGCGGGAC GGCGGCCCTT CGTTCGCGCA GCCCGCATTC CCCTGGACGC GAACGCGCCG
GCGTTCGACC TCGTACAATT CGCCCACCAA TACTCACGCG CCCAGGCCAT CCTGCTCGAC
GCCCATGTCG AAGGCTATGG CGGCGGCGGC AAGGCATTCA ATTGGTCACT CCTTCCACCA
AGCGTCGGCT CTCACCTCGT TTTATCTGGT GGACTCACGC CTGCAAACGT GACCGATGGC
ATCTTGCAGG TGCGGCCGCG CGGCCTTTCG CTCGCGGTTG ACGTCAGTTC CGGCGTGGAA
GCCGAAGGCC CCGACGGCCG TCCGCTGCGG GGCATCAAGG ACGCCGGCAA GATCCAACGC
TTCATCGCCG CCGTGCGCGC GGCCGATGGG CATTTTGCGA AGAACGATTG A
|
|---|
| Protein sequence | MSSPMPSSAP DTPLPESRRG DAPVPRTRIK ICGITREQDL DAAVQAGADA VGFVLYPKSQ
RAVTVQRAAA LARRLPPFVT PVLLFVNAEA AEVAAACDEI PGATLQFHGD ESPAACQEAA
GAGRRPFVRA ARIPLDANAP AFDLVQFAHQ YSRAQAILLD AHVEGYGGGG KAFNWSLLPP
SVGSHLVLSG GLTPANVTDG ILQVRPRGLS LAVDVSSGVE AEGPDGRPLR GIKDAGKIQR
FIAAVRAADG HFAKND
|
|---|
| |