Gene Aave_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1212 
Symbol 
ID4665902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1334801 
End bp1335349 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content68% 
IMG OID639822405 
Productprotein of unknown function YGGT 
Protein accessionYP_969577 
Protein GI120609899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0177861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTTCC AGATTGCTTC TTTCCTGCTG GACGTGATCG GCGGCCTGCT CACCGGCGCC 
TGCCTGCTGC GCCTGTACAT GCAGGCGCAG CGCGTTCCCT TTTCCAACCC GGTCGGCCGG
CTGGTCTTCG CCCTCAGCGA CTGGCTGGTG ATGCCGCTGC GCCGCATCAT TCCCCCCACC
GGCCGCTGGG ACTGGTCCAG CTTCGTGGCG GGTCTGCTGA TCCAGTTCGC GCAGTACCTG
CTGCTGTGGC TGCTGCTGGG CGGCCTGCTC GGCCTGGCAT GGCTGCCCTG GATGGCCCTG
TTCGGGCTGG CGCGGGCGGC GGTATCCGGG ATGATGGGGC TGCTCATCGT CGGCGCGATC
CTTTCCTGGG TGCAGACGCG CTCGCCGATC GCGGATGTCA TCGGGCGCCT CTGCGACCCG
ATCCTGCGGC CCCTGCGCCG TGTGATCCCC CTGCTGGGCG GAGTGGATCT TTCGCCCCTC
GTGGCCATCG TCCTGCTGCA GGTGGTGATG ATCGTGCTGG GCCACCTGCA GGGCGCCGTG
ATGCGATAG
 
Protein sequence
MLFQIASFLL DVIGGLLTGA CLLRLYMQAQ RVPFSNPVGR LVFALSDWLV MPLRRIIPPT 
GRWDWSSFVA GLLIQFAQYL LLWLLLGGLL GLAWLPWMAL FGLARAAVSG MMGLLIVGAI
LSWVQTRSPI ADVIGRLCDP ILRPLRRVIP LLGGVDLSPL VAIVLLQVVM IVLGHLQGAV
MR