Gene Aave_1211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1211 
Symbol 
ID4666121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1334058 
End bp1334726 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content72% 
IMG OID639822404 
Productpeptidase S16, lon domain-containing protein 
Protein accessionYP_969576 
Protein GI120609898 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0186807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCG CCCCACCTCC CCACGAGCCC CCGCCCCAGG CGCCGCTCAC GCTCAGTTCG 
CTGCCGCTGT TCCCCCTGGG CACGGTGCTC TTCCCGGGGG GCCTGCTGAC CCTGCGGGTG
TTCGAAGTGC GCTACCTGGA CATGGTGCGC AAATGCCGCC AGGCCGGGGC ACCCTTCGGC
GTGGTGGCCC TCACGGACGG CCACGAGGTG CGCCAGGCCG GTGCGGCGCC CGAGAAATTC
CACGACGTGG GCACGCTGGC GGCCATCTCG GAACTCGACG ACTCCCACCC CGGGCTCATC
GCCATGAAGG CCCAGGGGTC GGAGCGGTTC CGTATCGTGC GCCGCCAGTT GCTGCCGCAC
GGTCTCTGGA TCGCCGACAT CGAGCAGTTG CCGCCGGACG TGGCCGTGCC CGTGCCGCCG
GACCTGCGCA AGGCAGCGGC GGCCCTGGAA CAGGTGCTGG CACGCCTGCG CGACCGCAGC
CCCGACGACG GCAGCCTGCC CCTGCCCAGC GCCGCCCAGC TGGACGACTG CGGCTGGGTG
GCCAACCGCT GGTGCGAACT GCTGCCGGTG CCCATCGACC TGAAGCAGCA ACTCATGCAG
CTCGACAGCC CGCTGCTGCG GCTCGAACTC GTGGGCGACG TGCTGGACCG CACGGGTATC
GCGCCATGA
 
Protein sequence
MTFAPPPHEP PPQAPLTLSS LPLFPLGTVL FPGGLLTLRV FEVRYLDMVR KCRQAGAPFG 
VVALTDGHEV RQAGAAPEKF HDVGTLAAIS ELDDSHPGLI AMKAQGSERF RIVRRQLLPH
GLWIADIEQL PPDVAVPVPP DLRKAAAALE QVLARLRDRS PDDGSLPLPS AAQLDDCGWV
ANRWCELLPV PIDLKQQLMQ LDSPLLRLEL VGDVLDRTGI AP