Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1211 |
Symbol | |
ID | 4666121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1334058 |
End bp | 1334726 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639822404 |
Product | peptidase S16, lon domain-containing protein |
Protein accession | YP_969576 |
Protein GI | 120609898 |
COG category | [R] General function prediction only |
COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0186807 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCG CCCCACCTCC CCACGAGCCC CCGCCCCAGG CGCCGCTCAC GCTCAGTTCG CTGCCGCTGT TCCCCCTGGG CACGGTGCTC TTCCCGGGGG GCCTGCTGAC CCTGCGGGTG TTCGAAGTGC GCTACCTGGA CATGGTGCGC AAATGCCGCC AGGCCGGGGC ACCCTTCGGC GTGGTGGCCC TCACGGACGG CCACGAGGTG CGCCAGGCCG GTGCGGCGCC CGAGAAATTC CACGACGTGG GCACGCTGGC GGCCATCTCG GAACTCGACG ACTCCCACCC CGGGCTCATC GCCATGAAGG CCCAGGGGTC GGAGCGGTTC CGTATCGTGC GCCGCCAGTT GCTGCCGCAC GGTCTCTGGA TCGCCGACAT CGAGCAGTTG CCGCCGGACG TGGCCGTGCC CGTGCCGCCG GACCTGCGCA AGGCAGCGGC GGCCCTGGAA CAGGTGCTGG CACGCCTGCG CGACCGCAGC CCCGACGACG GCAGCCTGCC CCTGCCCAGC GCCGCCCAGC TGGACGACTG CGGCTGGGTG GCCAACCGCT GGTGCGAACT GCTGCCGGTG CCCATCGACC TGAAGCAGCA ACTCATGCAG CTCGACAGCC CGCTGCTGCG GCTCGAACTC GTGGGCGACG TGCTGGACCG CACGGGTATC GCGCCATGA
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Protein sequence | MTFAPPPHEP PPQAPLTLSS LPLFPLGTVL FPGGLLTLRV FEVRYLDMVR KCRQAGAPFG VVALTDGHEV RQAGAAPEKF HDVGTLAAIS ELDDSHPGLI AMKAQGSERF RIVRRQLLPH GLWIADIEQL PPDVAVPVPP DLRKAAAALE QVLARLRDRS PDDGSLPLPS AAQLDDCGWV ANRWCELLPV PIDLKQQLMQ LDSPLLRLEL VGDVLDRTGI AP
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