| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1206 |
|---|
| Symbol | |
|---|
| ID | 4668251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1328897 |
|---|
| End bp | 1329817 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639822399 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_969571 |
|---|
| Protein GI | 120609893 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.364896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0226613 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATCC ATTTCATCCA TTCCGGGCAA GCCTACCTGC CGGAACTGGG AGCCTACTCC
GCGTTCCTGC AGCAGTCCGG ACACCAGGCC GTGCTCCACA GCCATCCCGG CACGGTACCC
GGCGATGCCG AGGTACTGTG GTGGATCTGC GGGCTCGTGC CCCCGGCCAG CGCCCGGCGC
CATTCCGGGG CGTTCCAGGT GCACGAATAC GCGTCGGCAT CGGTGCCGCC CTGCGCCTGG
CTCAAGGACA GGATCAAATC CTGGCGCCAG CCCACTCCGG ATTACCGGAT CTTCCAGAAC
GCCTGGGTGC GCCAACGGCT CGGGTTCAAC GACGGGATTC CGTTCGAGTA CCGCGACATG
GGCGTTCCAG AAGCCTTCCT GTCGCGCTCG GGCACGCGGC GCAGCACACG TTTCGACTTC
GCCTACCTCG GAGACATGGA CCGTCTGCGC GGCTTCGCGC CGCTGCTGCA AGCCCTGGCA
CCGGCCGGAC GCACGCTGCT GCTCATAGGG GAGCCGCCCG GCGACCTGCG GGCCTCACTG
GGCCGCCTGC CCAACGTGAC GATGGCGGGA CGCGTGCCGC AGGGCGATGT CCCGGCCCTG
CTCGCGCAGG CGCGCTACGG CCTGAACCTG GTGCCGGTAC GCGCCCCCTA CGACCGGCAG
ACCTCCACCA AGCTGCTCGA ATACTGCGCA GTCGGGCTGC CCACCGTCTC CACCGACTAC
CGCTGGGTGC GGGAATTCGA GCGCACGGCG GGCGCGCGGT TCATCTACCT TCCCGCCCAC
GCGACGGTGG CGCGCTATGC GGATCTGCTG GGAACCGGCC TGGACGAGCA GCCCCGCACC
GTCCCGCCGA TGCAAGCGCA TGCCTGGAAT GCGCTGCTGG CCCGCATGCA CATATGGCGC
CGATGGCAGG AGCGCGCATG A
|
|---|
| Protein sequence | MLIHFIHSGQ AYLPELGAYS AFLQQSGHQA VLHSHPGTVP GDAEVLWWIC GLVPPASARR
HSGAFQVHEY ASASVPPCAW LKDRIKSWRQ PTPDYRIFQN AWVRQRLGFN DGIPFEYRDM
GVPEAFLSRS GTRRSTRFDF AYLGDMDRLR GFAPLLQALA PAGRTLLLIG EPPGDLRASL
GRLPNVTMAG RVPQGDVPAL LAQARYGLNL VPVRAPYDRQ TSTKLLEYCA VGLPTVSTDY
RWVREFERTA GARFIYLPAH ATVARYADLL GTGLDEQPRT VPPMQAHAWN ALLARMHIWR
RWQERA
|
|---|
| |