Gene Aave_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1201 
Symbol 
ID4667456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1322086 
End bp1324134 
Gene Length2049 bp 
Protein Length682 aa 
Translation table11 
GC content73% 
IMG OID639822395 
Producthypothetical protein 
Protein accessionYP_969567 
Protein GI120609889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00706806 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTGCGTG ATCCTGCTCT CCCTGAAGTC GCCGTCTCCG CCCGGCCCCA CCGAGCCGTA 
TGGGGCACGG CCGTCACCTG CATCGCGGCC GCATGCGCCC TGGCCGGCTG CGAACGTGTC
ACGACGCCCG CTCCCCAGGC GGCTGCCAGC GTGCCCGCGC CGGAGCCCGC GGCTTCAGCG
CCCGCCGCAG CAGCCGCGCC TGCCGCGGTG CCGGTGGCCT ACACGCCGCC GTCCGCAGAC
GTCCTCTACC AGATGGTGGC CCCGATCGCA CTCTATCCCG ACAAGCTCGT GGCCCAGGTG
CTCGCCGGCG CAACCTACCC GGACCAGGTC TCTGCCGCTG AAACCTGGCT CGCCCAGAAT
CCGGGGCTGA AGGGCAGCGC CCTGGTGAAT GCGGTGGATC CCCAGCCCTG GGATCCCAGC
GTGAAGTCGC TGACGGCGTT TCCCAATGTG CTGGAGCAGA TGGCCTCCAA CCTGCCCTGG
ACGACGGCTC TCGGCAAGGC CTATTACCAC GATCCTGCCG ACGTGATGAA CGCCATACAG
GCCATGCGTG CCCGCGCCGC CCATGCCGGT ACGCTGAAGA GTTCACCGCG CCTGCGCGTG
GCGACGGTGG AAGCCCGTTC CCTGCCGCCG CCGCTGCCGC CATCGCAGGC ACCCGTGGCG
CTGTACCAGG GGCCGGCGGT GGTCGCACCG CCACCCACCG TCATCACCAT CGAGCCTGCC
GAGGTGGAGA CGGTCTATGT GCCGCGCTAT GACCCGGCCG TGGTGTACGG CACGCCGGTG
CCCGTGTATC CCAGCTACCG CTGGGCCGTG CCGGTGGTGC AGCCGGCACC GGTGGCGGTC
GCCGCGGGGC CGGATCCCGT GGCCGTGGGT GCACTGGCCT TCGGTGCCGG CGTCCTGGTG
GGCGCGCTGG CCACCAGCCA CCACCATGGC TGGGGATGGA ACGACTGGAA TCTGCACTGG
GGACCTCCGC CTCCGCCGCC GATCGCCTGG GGTCCCGCCC CGCCGCCGCC CGCCTGGGGG
CCTGCGGTCG TGTACCGCGG AGCCACCTAC GTGTCGAACT CCCCCACGGT GATCGAGAAC
ATCCATAACC GCATCACGGT GAACAACCGC AATGTCTATG TGAACGCCCC GGGCCAGCCG
CCGGGCCTGC CTGCACCGGG TGCGCCCGCC ATGGGATTCG CCGGTGGGCC GGCCGCACCC
GTGCGCGCTG CCATGGCACC TCCGATGGGC CCGAACGGAC CGCACGGCCA GGCGCTGGCC
GCGGCACTGC AGGACAGCCA CGCGGCAGGG CAGCGGCCCA TGCCGTTCGA GCAGCGCCAC
ATGCAGGCCC CGCCACTGGC CGGCGACCGG AACGGCTTCC ACCAGTCCCA GGCCCTCATG
CAGGGCCCGG GCCGGGCACC GATGCCGGTG GCGCCGGGCC AGCCCGCCGC CGCGCACGCT
TTCGCCCAGC CGGGCGCTGC GGCCGTGCCC GGCGCGCCGC GCCCATTGTC CGCGGCGTTC
CAGGACAGCC GCGCCGGCCA TGGCACGCGT CCCTTGGAAC CTCGGCATTT CCCGGAACTG
CAGCGTCCCG TCGAACCACA GCATGCTGCC GGACACCGGA GCAACCCGGC GGCCCCGGCC
ATGGCGTCCG CCATGGGCCT GGCTCCGGCA GGACTGCAGC CGCGACCGGA GAACGGGCGC
GCCAACCCCG CCATGCCCGA GAACCGGAAC CCGCATGCCG CCTTCGTGGC GCCTCCTGCC
CCCATGCCGG CGCCGTCGCA GCGCCCGCAG ATGCCGGCGG AGATGTCGAT GGCCCATGCT
CTGCAGCAGC CTCGCCAGAT GGCGGTGCCT GCTCCGCGCA TGCAGCAGCC CGTCCACATG
CCGCAGCCGG TGCAGCAGCA GCCCATGCAT GCCGAGCCGC GCAGCATGCC GGTCGCGGCG
GCCATGCATG CGCCGCAGCA GCCCGTGCCG CGGCCGGCCA TGCACGAGGC CCTGCGCGAA
CCCCGGCCCG CGCCGCAGCC GCAGGCGCCG CACCACGGGG GCGGACACAA GCCGCACGAA
GGCGGCTGA
 
Protein sequence
MVRDPALPEV AVSARPHRAV WGTAVTCIAA ACALAGCERV TTPAPQAAAS VPAPEPAASA 
PAAAAAPAAV PVAYTPPSAD VLYQMVAPIA LYPDKLVAQV LAGATYPDQV SAAETWLAQN
PGLKGSALVN AVDPQPWDPS VKSLTAFPNV LEQMASNLPW TTALGKAYYH DPADVMNAIQ
AMRARAAHAG TLKSSPRLRV ATVEARSLPP PLPPSQAPVA LYQGPAVVAP PPTVITIEPA
EVETVYVPRY DPAVVYGTPV PVYPSYRWAV PVVQPAPVAV AAGPDPVAVG ALAFGAGVLV
GALATSHHHG WGWNDWNLHW GPPPPPPIAW GPAPPPPAWG PAVVYRGATY VSNSPTVIEN
IHNRITVNNR NVYVNAPGQP PGLPAPGAPA MGFAGGPAAP VRAAMAPPMG PNGPHGQALA
AALQDSHAAG QRPMPFEQRH MQAPPLAGDR NGFHQSQALM QGPGRAPMPV APGQPAAAHA
FAQPGAAAVP GAPRPLSAAF QDSRAGHGTR PLEPRHFPEL QRPVEPQHAA GHRSNPAAPA
MASAMGLAPA GLQPRPENGR ANPAMPENRN PHAAFVAPPA PMPAPSQRPQ MPAEMSMAHA
LQQPRQMAVP APRMQQPVHM PQPVQQQPMH AEPRSMPVAA AMHAPQQPVP RPAMHEALRE
PRPAPQPQAP HHGGGHKPHE GG