| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1196 |
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| Symbol | rnc |
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| ID | 4665101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1316723 |
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| End bp | 1317409 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639822390 |
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| Product | ribonuclease III |
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| Protein accession | YP_969562 |
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| Protein GI | 120609884 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0711323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00493903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | TTGGTTTCAC CCAGCCTTTC CGCGCTGCAG GACCGCCTGC AGCATGTTTT CTCCGATCCA
TCCCTGCTGC AGCGGGCCAC CACGCACCGC AGCTTCTCGG CCGACCATAA CGAACGCCTG
GAGTTTCTCG GCGACTCGGT GCTGAACCTG GCCGTATCGA GCCTGCTCTA CCAGCGCCTG
CGCGACCTGC CGGAAGGCGA TCTCTCCCGG GTGCGCGCCA ACTTGGTGCG CCAGGAGGCG
CTGCACAGCC TGGCCCTGGG CCTGCAGTTG CCGCAGGTGC TGCGCCTGGG CGAGGGGGAG
ACGAAATCCG GTGGCAAGCA GCGCCCGTCC ATCCTGGCCG ATGCCCTGGA AGCCCTGATC
GGGGCCGTCT ACCTGGATGC CGGCTACCAG TGCGCCGAGG CGCTGGTGCA CCGGCTCTAC
CAGGACGTGG AGATCAATCC TCGCATGCCG GCGGCCGAGA AGGATGCCAA GACCGCATTG
CAGGAGTGGC TGCAGGGCCG CAAAATGAAG CTGCCGCAGT ACCGCGTGGT CGCCACGGTG
GGGGCTGCCC ACCGGCAGAC CTTCGACGTG GAATGCGACA TCCCGGAACT GGGCCTGACC
GAGCGCGGCA TCGGCGGATC GCGGAGGGCG GGCGAACAGG CTGCCGCCGC CGCCATGCTG
GCCACCCTGA AAGCGAAACA CCCATGA
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| Protein sequence | MVSPSLSALQ DRLQHVFSDP SLLQRATTHR SFSADHNERL EFLGDSVLNL AVSSLLYQRL
RDLPEGDLSR VRANLVRQEA LHSLALGLQL PQVLRLGEGE TKSGGKQRPS ILADALEALI
GAVYLDAGYQ CAEALVHRLY QDVEINPRMP AAEKDAKTAL QEWLQGRKMK LPQYRVVATV
GAAHRQTFDV ECDIPELGLT ERGIGGSRRA GEQAAAAAML ATLKAKHP
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