Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1194 |
Symbol | |
ID | 4667397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1315266 |
End bp | 1316240 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639822388 |
Product | signal peptidase I |
Protein accession | YP_969560 |
Protein GI | 120609882 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.992009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00558378 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAAGCCA TGCAATATGT GACCGCCGCG ATCCTGGCGG CTTTCGTCGG CTACGTGGGC GCCTGGTACG TGGGCGCCAT CGAAGGCAAT TTCGCGCTGC TGCTGCTGCT GGCGACGGTG GTGACCGGCG CCTACTGGCT GGCCGAGCGC CTCGTCTTCC TGCCGCGGCG CCGCCGCGCG GCCCAGGCCA TCGAGGAGGC GGCCGTGCAG CGGCGCGCCG AGCTGGACCG CATGGGCATC GCCAAGGTGG ACGGCGACGT GCAGGAGGCG AAGGACCGCA TCCTGATGCA GCCGTGGTGG CTGGACTGGA CGGCGGGACT CTTCCCGGTG ATCGCCATCG TCTTCGTGCT GCGCTCGTTC CTCTTCGAGC CGTTCAAGAT CCCCTCCGGA TCGATGATCC CGACCTTGCT GGTGGGCGAC CTGATCCTCG TGAACAAGTT CACCTACGGC ATCCGGCTGC CGGTGATCAA CAAGAAGATC ACGCAGGGCA CGCCGCCCCA GCGCGGCGAC GTGATGGTGT TCCGCTATCC GCCGCAGCCC AGCATGGACT ACATCAAGCG CGTGGTCGGC GTGCCGGGCG ACGAGATCGC CTACCTGAAC AAGCGGCTCA CGGTGAACGG CAAGCCGGTC GAGACCACGG CGCTGCCCGA TTTCCTCGAC GAGGACACGA TGCGCTACTT CAAGCAGTAC GACGAGCATC TGGGCGCCAG GCCGCACCGC ATGATCAACA ACCCCGACGT GCCGGCGTTC ATCCAGGGAG CCAGCGACTA CGCCTTCCGC GAGAATTGCC GCTACAGCGT GGAAGGCGTG GTGTGCAAGG TGCCCGAGGG CCACTATTTC ATGATGGGCG ACAACCGCGA TAATTCGTTC GATTCCCGCT ATTGGGGCTT CGTGCCCGAC GCGAACATCG TCGGCAAGGC CTTTTTCGTG TGGATGAATT TCGGCAACCT GAAGCGCATC GGCGGCTTCC AGTAA
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Protein sequence | MQAMQYVTAA ILAAFVGYVG AWYVGAIEGN FALLLLLATV VTGAYWLAER LVFLPRRRRA AQAIEEAAVQ RRAELDRMGI AKVDGDVQEA KDRILMQPWW LDWTAGLFPV IAIVFVLRSF LFEPFKIPSG SMIPTLLVGD LILVNKFTYG IRLPVINKKI TQGTPPQRGD VMVFRYPPQP SMDYIKRVVG VPGDEIAYLN KRLTVNGKPV ETTALPDFLD EDTMRYFKQY DEHLGARPHR MINNPDVPAF IQGASDYAFR ENCRYSVEGV VCKVPEGHYF MMGDNRDNSF DSRYWGFVPD ANIVGKAFFV WMNFGNLKRI GGFQ
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