| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1192 |
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| Symbol | |
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| ID | 4669317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1311493 |
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| End bp | 1312974 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639822386 |
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| Product | protease Do |
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| Protein accession | YP_969558 |
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| Protein GI | 120609880 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0123913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0156708 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCCA TGCCGTGTGA CCCATCGCGT TTCCGGACAC TCGTCCGCTC CCTCGCTGCC
GCTGGAGCCG TCGCCCTGTT CCCCGCCGGT GCGCTGCATG CGCAGGCTGC CACGGCCAGC
CCGCCGCCGC TGGTGCAGGG CCTGCCCGAC TTCACCGACC TGGTGGACCA GGTCGGCCCG
GCGGTGGTGA ACATCCGGAC CATCGAGAAG GCGCCCGACC GCTCCTCCAC CAGCGGCATG
GACGAGGAAA TGCTGGAGTT CTTCAAGCGC TTCGGCCTGC CCATGCCGGG CGTTCCGCGC
CAGCAGCGTC CCCAGCGCCC CGACGAAGAG CAGCCACGCG GCGTGGGTTC CGGCTTCATC
GTGACCTCCG ACGGCTACGT GATGACGAAT GCCCACGTGG TGGAGGGCGC GCAGGAAGTG
CTCGTCACCC TCACCGACAA GCGTGAATTC AAGGCCAAGA TCGTGGGTTC GGACAAGCGC
ACGGATGTGG CGGTGGTGAA GATCGACGCC ACGGGGCTTC CCGCGGTGAA GGTCGGCGAC
ATGAACCGGC TGCGCGTCGG TGAATGGGTG ATGGCCATCG GCTCGCCGTT CGGCCTCGAG
AACACGGTCA CCGCCGGCAT CGTGAGTGCC AAGCAGCGCG ACACGGGCGA CTACCTGCCG
TTCATCCAGA CGGACGTGGC CATCAATCCC GGCAATTCGG GCGGCCCGCT CATCAACATG
CGCGGCGAAG TGGTGGGCAT CAACAGCCAG ATCTACTCGC GTTCCGGCGG ATTCATGGGC
ATCTCCTTCG CCATCCCGAT CGACGAGGCC ATCCGTGTGA GCGACCAGCT GCGCGCCACG
GGGCGCGTGA CCCGCGGGCG CATCGGCGTG CAGATCGGCC AGGTCACCAA GGACGTTGCG
GAGTCTATCG GCCTGGGCAA GACCCAGGGT GCGCTGGTGA CGGGCGTGGA GACCGGCTCG
CCGGCGGACA AGGCCGGCGT GGAGGCGGGC GACATCATCA CCCGCTTCGA CGGCAAGAGC
ATCGACAAGA TTTCCGACCT GCCGCGCCTC GTGGGCAACA CCAAGCCCGG CAACAAGAGC
ACGGTGACGG TGTTCCGGCG CGGGGCCACG AAGGATCTGC CCATCACGGT GGCGGAGGTG
GAACCCGACG ACAGGCCGAC GGCCGCAGCC GGCGACCGAG GCGCGAAGCC CAAGGCATCG
CCTGCCGCGC TGCAGCTCGG CCTGGCGGCG GTCGATCTGA CGGATGCCCA GAAGAAGGAG
CTCAAGCTCA AGGGCGGGGT GCGCGTGACG GGCGTGACCG ATGCCGCGGC CCGTGCAGGG
CTGCGGGAGG GCGACGTCAT CCTGGGCGTC GCCAATACCG AGATCTCCGG CATGAAGGAC
TTCGAAGCCG TGCTGGCCAA GGCCGACAAA TCCAAGCCCA TCAATGTGCT GTTCCGCAGG
GGCGACTGGA CCCAATATGC CGTGATCCGT CCGAGCCGCT GA
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| Protein sequence | MFSMPCDPSR FRTLVRSLAA AGAVALFPAG ALHAQAATAS PPPLVQGLPD FTDLVDQVGP
AVVNIRTIEK APDRSSTSGM DEEMLEFFKR FGLPMPGVPR QQRPQRPDEE QPRGVGSGFI
VTSDGYVMTN AHVVEGAQEV LVTLTDKREF KAKIVGSDKR TDVAVVKIDA TGLPAVKVGD
MNRLRVGEWV MAIGSPFGLE NTVTAGIVSA KQRDTGDYLP FIQTDVAINP GNSGGPLINM
RGEVVGINSQ IYSRSGGFMG ISFAIPIDEA IRVSDQLRAT GRVTRGRIGV QIGQVTKDVA
ESIGLGKTQG ALVTGVETGS PADKAGVEAG DIITRFDGKS IDKISDLPRL VGNTKPGNKS
TVTVFRRGAT KDLPITVAEV EPDDRPTAAA GDRGAKPKAS PAALQLGLAA VDLTDAQKKE
LKLKGGVRVT GVTDAAARAG LREGDVILGV ANTEISGMKD FEAVLAKADK SKPINVLFRR
GDWTQYAVIR PSR
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