Gene Aave_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1192 
Symbol 
ID4669317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1311493 
End bp1312974 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content68% 
IMG OID639822386 
Productprotease Do 
Protein accessionYP_969558 
Protein GI120609880 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0123913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0156708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCCA TGCCGTGTGA CCCATCGCGT TTCCGGACAC TCGTCCGCTC CCTCGCTGCC 
GCTGGAGCCG TCGCCCTGTT CCCCGCCGGT GCGCTGCATG CGCAGGCTGC CACGGCCAGC
CCGCCGCCGC TGGTGCAGGG CCTGCCCGAC TTCACCGACC TGGTGGACCA GGTCGGCCCG
GCGGTGGTGA ACATCCGGAC CATCGAGAAG GCGCCCGACC GCTCCTCCAC CAGCGGCATG
GACGAGGAAA TGCTGGAGTT CTTCAAGCGC TTCGGCCTGC CCATGCCGGG CGTTCCGCGC
CAGCAGCGTC CCCAGCGCCC CGACGAAGAG CAGCCACGCG GCGTGGGTTC CGGCTTCATC
GTGACCTCCG ACGGCTACGT GATGACGAAT GCCCACGTGG TGGAGGGCGC GCAGGAAGTG
CTCGTCACCC TCACCGACAA GCGTGAATTC AAGGCCAAGA TCGTGGGTTC GGACAAGCGC
ACGGATGTGG CGGTGGTGAA GATCGACGCC ACGGGGCTTC CCGCGGTGAA GGTCGGCGAC
ATGAACCGGC TGCGCGTCGG TGAATGGGTG ATGGCCATCG GCTCGCCGTT CGGCCTCGAG
AACACGGTCA CCGCCGGCAT CGTGAGTGCC AAGCAGCGCG ACACGGGCGA CTACCTGCCG
TTCATCCAGA CGGACGTGGC CATCAATCCC GGCAATTCGG GCGGCCCGCT CATCAACATG
CGCGGCGAAG TGGTGGGCAT CAACAGCCAG ATCTACTCGC GTTCCGGCGG ATTCATGGGC
ATCTCCTTCG CCATCCCGAT CGACGAGGCC ATCCGTGTGA GCGACCAGCT GCGCGCCACG
GGGCGCGTGA CCCGCGGGCG CATCGGCGTG CAGATCGGCC AGGTCACCAA GGACGTTGCG
GAGTCTATCG GCCTGGGCAA GACCCAGGGT GCGCTGGTGA CGGGCGTGGA GACCGGCTCG
CCGGCGGACA AGGCCGGCGT GGAGGCGGGC GACATCATCA CCCGCTTCGA CGGCAAGAGC
ATCGACAAGA TTTCCGACCT GCCGCGCCTC GTGGGCAACA CCAAGCCCGG CAACAAGAGC
ACGGTGACGG TGTTCCGGCG CGGGGCCACG AAGGATCTGC CCATCACGGT GGCGGAGGTG
GAACCCGACG ACAGGCCGAC GGCCGCAGCC GGCGACCGAG GCGCGAAGCC CAAGGCATCG
CCTGCCGCGC TGCAGCTCGG CCTGGCGGCG GTCGATCTGA CGGATGCCCA GAAGAAGGAG
CTCAAGCTCA AGGGCGGGGT GCGCGTGACG GGCGTGACCG ATGCCGCGGC CCGTGCAGGG
CTGCGGGAGG GCGACGTCAT CCTGGGCGTC GCCAATACCG AGATCTCCGG CATGAAGGAC
TTCGAAGCCG TGCTGGCCAA GGCCGACAAA TCCAAGCCCA TCAATGTGCT GTTCCGCAGG
GGCGACTGGA CCCAATATGC CGTGATCCGT CCGAGCCGCT GA
 
Protein sequence
MFSMPCDPSR FRTLVRSLAA AGAVALFPAG ALHAQAATAS PPPLVQGLPD FTDLVDQVGP 
AVVNIRTIEK APDRSSTSGM DEEMLEFFKR FGLPMPGVPR QQRPQRPDEE QPRGVGSGFI
VTSDGYVMTN AHVVEGAQEV LVTLTDKREF KAKIVGSDKR TDVAVVKIDA TGLPAVKVGD
MNRLRVGEWV MAIGSPFGLE NTVTAGIVSA KQRDTGDYLP FIQTDVAINP GNSGGPLINM
RGEVVGINSQ IYSRSGGFMG ISFAIPIDEA IRVSDQLRAT GRVTRGRIGV QIGQVTKDVA
ESIGLGKTQG ALVTGVETGS PADKAGVEAG DIITRFDGKS IDKISDLPRL VGNTKPGNKS
TVTVFRRGAT KDLPITVAEV EPDDRPTAAA GDRGAKPKAS PAALQLGLAA VDLTDAQKKE
LKLKGGVRVT GVTDAAARAG LREGDVILGV ANTEISGMKD FEAVLAKADK SKPINVLFRR
GDWTQYAVIR PSR