| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1189 |
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| Symbol | |
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| ID | 4668953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1308897 |
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| End bp | 1309526 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639822383 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_969555 |
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| Protein GI | 120609877 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.209698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0286964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGCTT CCCTGCCCCC GCCTTCCCCT GCCGACAGCG ACCTCCAGCT CGTGGAGCGC
ACCGTGTCCG GCGACCAGCG GGCCTACGGG CTGCTGGTCG TGAAATACCA GCGCCGTATC
GAGCGCCTCA TCGGCCGCAT GGTGCGCGAC TCGGACCTGG TGCAGGACAT CGCCCAGGAA
ACCTTCCTGC GGGCCTACCG CGCACTGCAC CAGTTCCGCG GAGAAGCGCA GTTCTACACC
TGGCTCTACC GCATCGCGGT CAATACGGCG AAGAAGGCCT TGATGGACAT CAAGCGCAAT
CCCGTCATTT CCGAGAACGC ATTGCGCGGC GGAGAGGACG AGGATGAAAC TTCCCGTATC
GGACACGAAC TAACCAGCGA CGAAACCCCG GAAACCGTGA TGGCTGCGCA GGAGATTGCC
GCGGCGGTCA ACACGGCCAT GGAAGCGCTG CCGGAGGATC TGCGCCAGGC GGTCACGCTG
CGCGAGATCG AAGGCCTGAC CTATGAAGAA ATCGCCGAGG TGATGCAGTG CCCCATAGGA
ACGGTGCGAT CGAGGATATT CCGTGCCCGG GAGGCGATTT CCGCCCGGGT GCGACCTTTG
CTGGAAAAGC AGACAGGCAA GCGCTGGTGA
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| Protein sequence | MNASLPPPSP ADSDLQLVER TVSGDQRAYG LLVVKYQRRI ERLIGRMVRD SDLVQDIAQE
TFLRAYRALH QFRGEAQFYT WLYRIAVNTA KKALMDIKRN PVISENALRG GEDEDETSRI
GHELTSDETP ETVMAAQEIA AAVNTAMEAL PEDLRQAVTL REIEGLTYEE IAEVMQCPIG
TVRSRIFRAR EAISARVRPL LEKQTGKRW
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